GEO Browser - GEO

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497 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Sus scrofa		SRA Run Selector
GSE14584	MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing	Non-coding RNA profiling by high throughput sequencing	Sus scrofa	7	SRA Run Selector	Jakob Hedegaard	Nov 24, 2009
GSE17885	MicroRNAome of porcine prenatal and postnatal development.	Non-coding RNA profiling by high throughput sequencing	Sus scrofa	10	SRA Run Selector	Mingzhou Li	Feb 27, 2010
GSE19456	Aberrant host immune response induced by highly virulent PRRSV identified by digital gene expression tag profiling	Expression profiling by high throughput sequencing	Sus scrofa	3	SRA Run Selector	Yaosheng Chen	Dec 05, 2010
GSE19970	Understanding normal PRRSV infection in lung based on genome-wide transcriptome response identified by deep sequencing	Expression profiling by high throughput sequencing	Sus scrofa	3	SRA Run Selector	Yaosheng Chen	Dec 05, 2010
GSE24220	RNA-Seq transcriptome profiling of in vitro cultures of migrating porcine primordial germ cells and porcine fetal fibroblasts of mini pig embryos between days 17-24 of gestation	Expression profiling by high throughput sequencing	Sus scrofa	2	BED WIG SRA Run Selector	Hendrik Marks	Mar 24, 2011
GSE24443	Repertoire of porcine microRNAs in adult ovary and testis by deep sequencing.	Non-coding RNA profiling by high throughput sequencing	Sus scrofa	2	SRA Run Selector	Mingzhou Li	Mar 29, 2011
GSE25406	Comparative analyses of transcriptome during skeletal muscle development between pig breeds differing in muscle growth rate by deep-sequencing	Expression profiling by high throughput sequencing	Sus scrofa	20	TXT SRA Run Selector	Jason Karpac	Jun 18, 2012
GSE25923	A global view of the complexity of the porcine transcriptome using a full-sib pair with extreme phenotypes in growth and fat deposit by deep RNA sequencing (small RNA)	Non-coding RNA profiling by high throughput sequencing	Sus scrofa	6	TXT SRA Run Selector	Lusheng Huang	Dec 20, 2010
GSE26382	A global view of the complexity of the porcine transcriptome using a full-sib pair with extreme phenotypes in growth and fat deposit by deep RNA sequencing (mRNA)	Expression profiling by high throughput sequencing	Sus scrofa	6	TXT XML SRA Run Selector	Lusheng Huang	Jan 12, 2011
GSE28169	A Comparative Profile of the MicroRNA Transcriptome in Immature and Mature Porcine Testes using Solexa Deep Sequencing	Non-coding RNA profiling by high throughput sequencing	Sus scrofa	2	TXT SRA Run Selector	Chuanjiang Lian	Sep 23, 2011
GSE30334	MicroRNAome of pig adipose and muscle tissues	Non-coding RNA profiling by high throughput sequencing	Sus scrofa	11	SRA Run Selector	Mingzhou Li	May 16, 2012
GSE30344	An atlas of DNA methylomes in pig adipose and muscle tissues	Methylation profiling by high throughput sequencing	Sus scrofa	180	WIG SRA Run Selector	Mingzhou Li	May 16, 2012
GSE32257	Differential miRNAs between Sensitive and Resistant Pig to Escherichia coli F18 by deep sequencing	Non-coding RNA profiling by high throughput sequencing	Sus scrofa	6	TXT XLS SRA Run Selector	Lan Ye	Sep 21, 2014
GSE34742	MicroRNAome comparison between intramuscular and subcutaneous vascular stem cell adipogenesis	Non-coding RNA profiling by high throughput sequencing	Sus scrofa	4	TXT SRA Run Selector	Yunxue Guo	Dec 27, 2014
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Sus scrofa	47	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012
GSE36590	Lactation-Related microRNA Expression Profiles of Porcine Breast Milk Exosomes	Non-coding RNA profiling by high throughput sequencing	Sus scrofa	8	TXT SRA Run Selector	Mingzhou Li	Sep 17, 2012
GSE43013	Gene Expression Defines Natural Changes in Mammalian Lifespan	Expression profiling by high throughput sequencing	Acomys cahirinus Bos taurus Canis lupus familiaris Capra hircus Cavia porcellus Chlorocebus aethiops Equus caballus Erinaceus europaeus Felis catus Meles meles Meriones unguiculatus Mesocricetus auratus Murina leucogaster Mus musculus Oryctolagus cuniculus Peromyscus leucopus Petaurus breviceps Rattus norvegicus Suncus murinus Sus scrofa Tadarida brasiliensis Tamias sibiricus Ursus americanus	141	GTF TXT SRA Run Selector	Alexey Fushan	Feb 17, 2015
GSE43667	Deep Sequencing of the Porcine Endometrial Transcriptome on Day 14 of Pregnancy	Expression profiling by high throughput sequencing	Sus scrofa	8	GTF TXT SRA Run Selector	Stefan Michael Bauersachs	Mar 07, 2013
GSE43892	Transcriptome data used for gene annotation	Expression profiling by high throughput sequencing	Sus scrofa	4	TXT SRA Run Selector	Shilin Tian	Sep 19, 2013
GSE44171	RNA deep sequencing reveals novel candidate genes and polymorphisms in boar testis and liver tissues with divergent androstenone levels.	Expression profiling by high throughput sequencing	Sus scrofa	20	TXT SRA Run Selector	Sudeeep Sahadevan	Feb 09, 2013