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623 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					TDF
GSE139020	Homology-mediated inter-chromosomal interactions in hexaploid wheat lead to specific subgenome territories following polyploidization and introgression	Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Triticum aestivum	9	BED TDF TXT SRA Run Selector	yijing zhang	Nov 30, 2020
GSE213573	LaeA regulates mycelium growth by mediating H3K9 methylation in Myceliophthora thermophila [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Thermothelomyces thermophilus ATCC 42464	8	TDF TXT	Jingen Li	Apr 12, 2023
GSE213576	LaeA regulates mycelium growth by mediating H3K9 methylation in Myceliophthora thermophila	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Thermothelomyces thermophilus ATCC 42464	36	TDF TXT	Jingen Li	Apr 12, 2023
GSE62777	Integrative analyses of human reprogramming reveal dynamic nature of induced pluripotency	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	317	BED TDF TXT	Shannan J Ho Sui	Jul 16, 2015
GSE260812	Phosphorus deficiency alleviates cyanobacterial iron-limitation through a direct PhoB_x0002_ mediated gene regulation	Genome binding/occupancy profiling by high throughput sequencing	Synechocystis sp. PCC 6803	4	BED TDF XLS	wencan zheng	Mar 06, 2024
GSE199641	Effect of Hypoxia Preconditioning on the Regenerative Capacity of Adipose Tissue-Derived Mesenchymal Stem Cells in an Experimental Model of Atherosclerotic Renal Artery Stenosis	Methylation profiling by high throughput sequencing	Sus scrofa	13	TDF TXT	Naba Farooqui	Nov 15, 2022
GSE63304	Epigenetic inheritance uncoupled from sequence-specific recruitment	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	23	TDF SRA Run Selector	Gloria Jih	Nov 26, 2014
GSE81731	Distinct Functions of Argonaute Slicer in siRNA Maturation and Heterochromatin Formation [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	6	TDF SRA Run Selector	Nahid Iglesias	Dec 19, 2016
GSE81732	Distinct Functions of Argonaute Slicer in siRNA Maturation and Heterochromatin Formation [ncRNA-seq 1]	Non-coding RNA profiling by high throughput sequencing	Schizosaccharomyces pombe	2	TDF SRA Run Selector	Nahid Iglesias	Dec 19, 2016
GSE81733	Distinct Functions of Argonaute Slicer in siRNA Maturation and Heterochromatin Formation [ncRNA-seq 2]	Non-coding RNA profiling by high throughput sequencing	Schizosaccharomyces pombe	2	TDF SRA Run Selector	Nahid Iglesias	Dec 19, 2016
GSE81734	Distinct Functions of Argonaute Slicer in siRNA Maturation and Heterochromatin Formation	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Schizosaccharomyces pombe	10	TDF	Nahid Iglesias	Dec 19, 2016
GSE83495	A transcriptionally permissive histone H3 lysine 9 methylation state enables RNAi-mediated heterochromatin assembly	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	71	TDF SRA Run Selector	Gloria Jih	Jul 27, 2017
GSE94129	Accumulation of RNA on chromatin disrupts heterochromatic silencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	Schizosaccharomyces pombe	70	TDF SRA Run Selector	Mario Halic	Apr 12, 2017
GSE95821	Tailing and degradation of Argonaute-bound small RNAs protect the genome from uncontrolled RNAi	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Schizosaccharomyces pombe	30	TDF SRA Run Selector	Mario Halic	May 09, 2017
GSE102905	Automethylation-induced conformational switch in Clr4 (Suv39h) maintains epigenetic stability	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	111	TDF SRA Run Selector	Nahid Iglesias	Jul 17, 2018
GSE111851	RNAi mediates allele-specific epigenetic inheritance of heterochromatin [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	36	IGV TDF SRA Run Selector	Ruby Yu	Apr 26, 2018
GSE111859	RNAi mediates allele-specific epigenetic inheritance of heterochromatin	Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	57	IGV TDF	Ruby Yu	Apr 26, 2018
GSE121502	Shelterin and subtelomeric DNA sequences control nucleosome maintenance and genome stability	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	12	TDF SRA Run Selector	Sigurd J Braun	Oct 19, 2018
GSE125935	Native Chromatin Proteomics Reveals a Role for Specific Nucleoporins in Heterochromatin Organization and Maintenance.	Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	41	TDF SRA Run Selector	Nahid Iglesias	Dec 02, 2019
GSE156203	Chromatin localization of nucleophosmin determines the sorting and compartmentalization of ribosome biogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Schizosaccharomyces pombe	64	TDF SRA Run Selector	Mario Halic	Mar 01, 2023