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10 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Bifidobacterium longum			TXT
GSE164163	Analysis of EPS structure and transcriptome expression difference of Bifidobacterium longum W13 and W13R	Expression profiling by high throughput sequencing	Bifidobacterium longum	6		TXT SRA Run Selector	Tang jiao	Mar 17, 2021
GSE122256	Detection of carbohydrate-active enzyme genes in the rumen of young lambs	Genome variation profiling by array	Acetivibrio clariflavus Acetivibrio thermocellus Agathobacter rectalis Bacteroides fragilis Bacteroides ovatus Bacteroides sp. Bacteroides thetaiotaomicron Bacteroides xylanisolvens Bifidobacterium adolescentis Bifidobacterium animalis Bifidobacterium longum Butyrivibrio fibrisolvens Butyrivibrio hungatei Cellulomonas fimi Cellulomonas flavigena Cellulosilyticum ruminicola Clostridioides difficile Clostridium acetobutylicum Clostridium beijerinckii Clostridium cellulovorans Enterobacter sp. Enterococcus faecium Epidinium caudatum Epidinium ecaudatum Eudiplodinium maggii Fibrobacter intestinalis Fibrobacter succinogenes Lachnospira eligens Lactococcus lactis Levilactobacillus brevis Limosilactobacillus fermentum Microbiota Neocallimastix frontalis Neocallimastix patriciarum Orpinomyces joyonii Orpinomyces sp. Piromyces communis Piromyces rhizinflatus Piromyces sp. Piromyces sp. 'equi' Polyplastron multivesiculatum Pseudobacteroides cellulosolvens Pseudobutyrivibrio xylanivorans Roseburia hominis Roseburia intestinalis Ruminiclostridium cellulolyticum Ruminococcus albus Ruminococcus champanellensis Ruminococcus flavefaciens Ruminococcus sp. Segatella bryantii Selenomonas ruminantium Xylanibacter ruminicola [Eubacterium] cellulosolvens uncultured Neocallimastigales	6		TXT	Evelyne Forano	Oct 01, 2019
GSE107550	The FibroChip, a functional DNA microarray to monitor cellulolysis and hemicellulolysis activities of rumen microbiota	Expression profiling by array Other	Acetivibrio clariflavus Acetivibrio thermocellus Agathobacter rectalis Bacteroides fragilis Bacteroides ovatus Bacteroides sp. Bacteroides thetaiotaomicron Bacteroides xylanisolvens Bacteroides xylanisolvens XB1A Bifidobacterium adolescentis Bifidobacterium animalis Bifidobacterium longum Butyrivibrio fibrisolvens Butyrivibrio hungatei Cellulomonas fimi Cellulomonas flavigena Cellulosilyticum ruminicola Clostridioides difficile Clostridium acetobutylicum Clostridium beijerinckii Clostridium cellulovorans Enterobacter sp. Enterococcus faecium Epidinium caudatum Epidinium ecaudatum Escherichia coli K-12 Eudiplodinium maggii Fibrobacter intestinalis Fibrobacter succinogenes Fibrobacter succinogenes subsp. succinogenes S85 Lachnospira eligens Lactococcus lactis Levilactobacillus brevis Limosilactobacillus fermentum Neocallimastix frontalis Neocallimastix patriciarum Orpinomyces joyonii Orpinomyces sp. Piromyces communis Piromyces rhizinflatus Piromyces sp. Piromyces sp. 'equi' Polyplastron multivesiculatum Pseudobacteroides cellulosolvens Pseudobutyrivibrio xylanivorans Roseburia hominis Roseburia intestinalis Ruminiclostridium cellulolyticum Ruminococcus albus Ruminococcus champanellensis Ruminococcus flavefaciens Ruminococcus sp. Segatella bryantii Selenomonas ruminantium Xylanibacter ruminicola [Eubacterium] cellulosolvens bovine gut metagenome uncultured Neocallimastigales	14		TXT	Sophie Comtet-Marre	Dec 01, 2017
GSE87697	RNA sequencing of Bifidobacterium longum subsp. longum SC596 in response to various substrates	Expression profiling by high throughput sequencing	Bifidobacterium longum	18		TXT SRA Run Selector	Danielle G Lemay	Oct 08, 2016
GSE65320	Next generation sequencing based transcriptomic analysis of oxidative stress response in Bifidobacterium longum BBMN68	Expression profiling by high throughput sequencing	Bifidobacterium longum	3		TXT SRA Run Selector	Fanglei Zuo	Jan 26, 2016
GSE46446	Next generation sequencing based transcriptomic analysis of bile stress response in Bifidobacterium longum BBMN68	Expression profiling by high throughput sequencing	Bifidobacterium longum	2		TXT SRA Run Selector	Haoran An	Jun 29, 2014
GSE26772	In vitro transcriptional profiling of Bacteroides thetaiotaomicron in lactose, galactose and human milk oligosaccharides	Expression profiling by array Third-party reanalysis	Bacteroides thetaiotaomicron Bifidobacterium longum	8		CEL TXT	Angela M Marcobal	Jan 01, 2013
GSE16039	Bifidobacterium longum mutant	Expression profiling by array	Bifidobacterium longum Bifidobacterium longum NCC2705	3		TXT	Valeria Mozzetti	Mar 29, 2010
GSE14628	Bifidobacterium longum mutants and resistance to Heat-Shock	Expression profiling by array	Bifidobacterium longum Bifidobacterium longum NCC2705	24		TXT	Bernard Berger	Dec 21, 2009
GSE14896	Physiological stability of Bifidobacterium longum NCC2705 under continuous culture conditions	Expression profiling by array	Bifidobacterium longum Bifidobacterium longum NCC2705	4		TXT	Valeria Mozzetti	Apr 30, 2009