GEO Browser - GEO

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92 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome variation profiling by high throughput sequencing	Mus musculus
GSE263567	Brd4::Nutm1 fusion gene initiates NUT carcinoma in vivo [WGS]	Genome variation profiling by high throughput sequencing	Mus musculus	4	VCF	Bin Gu	May 07, 2024
GSE229212	Development of a ß-Globin Gene Replacement Strategy as a Therapeutic Approach for ß-Hemoglobinopathies	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	69	CSV TXT VCF	Kristen Seim	Apr 01, 2024
GSE214438	Age-associated chromatin re-organization in progenitor B cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	76	BED BEDPE TXT	Yaqiang Cao	Mar 01, 2024
GSE244578	Sequencing-based Functional Assays for Classification of BRCA2 Variants in Mouse ES Cells	Genome variation profiling by high throughput sequencing	Mus musculus	176	XLSX	Shyam Sharan	Nov 20, 2023
GSE209815	Characterization of a strain-specific Cd1 reference genome reveals potential inter- and intra-strain functional variability [gDNA]	Genome variation profiling by high throughput sequencing	Mus musculus	5	BED FA GTF TXT VCF	Isaac Jacob Kremsky	Jun 08, 2023
GSE209816	Characterization of a strain-specific Cd1 reference genome reveals potential inter- and intra-strain functional variability	Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	9	NARROWPEAK	Isaac Jacob Kremsky	Jun 08, 2023
GSE181581	IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression [mouse sWGS]	Genome variation profiling by high throughput sequencing	Mus musculus	24	CSV SRA Run Selector	Danny Misiak	May 31, 2023
GSE181582	IGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	264		Danny Misiak	May 31, 2023
GSE220997	Pre-clinical models for prediction of immunotherapy outcomes and immune evasion mechanisms in genetically heterogeneous multiple myeloma	Expression profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	108	RDS	Cristina Perez	Jan 31, 2023
GSE217479	Immunoediting instructs tumor metabolic reprogramming to support immune evasion [ExomeSeq]	Genome variation profiling by high throughput sequencing	Mus musculus	6	TXT VCF	Ping-Chih Ho	Nov 15, 2022
GSE217482	Immunoediting instructs tumor metabolic reprogramming to support immune evasion	Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	45	BED BIGWIG TXT VCF	Ping-Chih Ho	Nov 15, 2022
GSE157083	Memory-induced epigenome in Huntington's disease (HD) mice [ChIP-seq]	Genome variation profiling by high throughput sequencing	Mus musculus	28	WIG SRA Run Selector	Charles DECRAENE	Oct 06, 2022
GSE211975	Circadian clock controls rhythms in ketogenesis by interfering with PPARa transcriptional network	Genome variation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	36	TXT	Roman Kondratov	Aug 31, 2022
GSE164906	"Stripe" transcription factors provide accessibility to co-binding partners in mammalian genomes.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Genome variation profiling by high throughput sequencing	Mus musculus	476	BW TAB VCF	Yongbing Zhao	Jul 21, 2022
GSE165136	SNP effect on chromatin accessibility (Whole genome sequencing)	Genome variation profiling by high throughput sequencing	Mus musculus	3	VCF SRA Run Selector	Yongbing Zhao	Jul 21, 2022
GSE189078	EBF1 contributes to the balance of lympho-myeloid fate in haematopoietic progenitors via B-lymphoid priming and Cebpa antagonism	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	32	BW H5	Aurelie Lenaerts	Jun 30, 2022
GSE171127	Comparative parallel meta-analysis of cells undergoing reprogramming to pluripotency and trophectoderm states	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	184	BETA BIGWIG MTX TSV TXT SRA Run Selector	Tommy Kaplan	Apr 28, 2022
GSE160659	Next Generation Sequencing Analysis of Mice Glioma Exomes	Genome variation profiling by high throughput sequencing	Mus musculus	6	TXT SRA Run Selector	Chong Liu	Jan 11, 2022
GSE145921	Genomic and transcriptomic analysis of medulloblastoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	33	BED BW CSV TXT SRA Run Selector	Zaili Luo	Dec 31, 2021
GSE163620	The conservation and divergence of epigenitic reprogramming during mammalian early development	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Mus musculus Rattus norvegicus Sus scrofa	188	BW TXT SRA Run Selector	Wei Xie	Nov 26, 2021