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8 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Clostridium beijerinckii
GSE150480	Co-culturing Bacillus subtilis and wastewater microbial community in a bio-electrochemical system enhances denitrification and butyrate formation	Expression profiling by high throughput sequencing	Clostridium beijerinckii Clostridium butyricum	32		CSV SRA Run Selector	Shadi Rahimi	May 15, 2020
GSE122256	Detection of carbohydrate-active enzyme genes in the rumen of young lambs	Genome variation profiling by array	Acetivibrio clariflavus Acetivibrio thermocellus Agathobacter rectalis Bacteroides fragilis Bacteroides ovatus Bacteroides sp. Bacteroides thetaiotaomicron Bacteroides xylanisolvens Bifidobacterium adolescentis Bifidobacterium animalis Bifidobacterium longum Butyrivibrio fibrisolvens Butyrivibrio hungatei Cellulomonas fimi Cellulomonas flavigena Cellulosilyticum ruminicola Clostridioides difficile Clostridium acetobutylicum Clostridium beijerinckii Clostridium cellulovorans Enterobacter sp. Enterococcus faecium Epidinium caudatum Epidinium ecaudatum Eudiplodinium maggii Fibrobacter intestinalis Fibrobacter succinogenes Lachnospira eligens Lactococcus lactis Levilactobacillus brevis Limosilactobacillus fermentum Microbiota Neocallimastix frontalis Neocallimastix patriciarum Orpinomyces joyonii Orpinomyces sp. Piromyces communis Piromyces rhizinflatus Piromyces sp. Piromyces sp. 'equi' Polyplastron multivesiculatum Pseudobacteroides cellulosolvens Pseudobutyrivibrio xylanivorans Roseburia hominis Roseburia intestinalis Ruminiclostridium cellulolyticum Ruminococcus albus Ruminococcus champanellensis Ruminococcus flavefaciens Ruminococcus sp. Segatella bryantii Selenomonas ruminantium Xylanibacter ruminicola [Eubacterium] cellulosolvens uncultured Neocallimastigales	6		TXT	Evelyne Forano	Oct 01, 2019
GSE125085	Method for absolute quantification of microbial communities by using both microarrays and competitive PCR	Other	Acinetobacter baumannii Aggregatibacter actinomycetemcomitans Bacillus cereus Bacteria Bifidobacterium adolescentis Campylobacter rectus Capnocytophaga gingivalis Cereibacter sphaeroides Clostridium beijerinckii Cutibacterium acnes Deinococcus radiodurans Enterococcus faecalis Escherichia coli Fusobacterium nucleatum Fusobacterium nucleatum subsp. nucleatum Helicobacter pylori Homo sapiens Lactobacillus gasseri Neisseria meningitidis Phocaeicola vulgatus Porphyromonas gingivalis Prevotella intermedia Prevotella nigrescens Pseudomonas aeruginosa Schaalia odontolytica Staphylococcus aureus Staphylococcus epidermidis Streptococcus agalactiae Streptococcus gordonii Streptococcus intermedius Streptococcus mutans Tannerella forsythia Treponema denticola	178		CSV	Naoyuki Togawa	Jan 16, 2019
GSE100024	RNA-seq analysis of glucose fermentation by the natural Isopropanol producer Clostridium beijerinckii DSM6423	Expression profiling by high throughput sequencing	Clostridium beijerinckii	15		CSV SRA Run Selector	Frederique Bidard	Mar 05, 2018
GSE107550	The FibroChip, a functional DNA microarray to monitor cellulolysis and hemicellulolysis activities of rumen microbiota	Expression profiling by array Other	Acetivibrio clariflavus Acetivibrio thermocellus Agathobacter rectalis Bacteroides fragilis Bacteroides ovatus Bacteroides sp. Bacteroides thetaiotaomicron Bacteroides xylanisolvens Bacteroides xylanisolvens XB1A Bifidobacterium adolescentis Bifidobacterium animalis Bifidobacterium longum Butyrivibrio fibrisolvens Butyrivibrio hungatei Cellulomonas fimi Cellulomonas flavigena Cellulosilyticum ruminicola Clostridioides difficile Clostridium acetobutylicum Clostridium beijerinckii Clostridium cellulovorans Enterobacter sp. Enterococcus faecium Epidinium caudatum Epidinium ecaudatum Escherichia coli K-12 Eudiplodinium maggii Fibrobacter intestinalis Fibrobacter succinogenes Fibrobacter succinogenes subsp. succinogenes S85 Lachnospira eligens Lactococcus lactis Levilactobacillus brevis Limosilactobacillus fermentum Neocallimastix frontalis Neocallimastix patriciarum Orpinomyces joyonii Orpinomyces sp. Piromyces communis Piromyces rhizinflatus Piromyces sp. Piromyces sp. 'equi' Polyplastron multivesiculatum Pseudobacteroides cellulosolvens Pseudobutyrivibrio xylanivorans Roseburia hominis Roseburia intestinalis Ruminiclostridium cellulolyticum Ruminococcus albus Ruminococcus champanellensis Ruminococcus flavefaciens Ruminococcus sp. Segatella bryantii Selenomonas ruminantium Xylanibacter ruminicola [Eubacterium] cellulosolvens bovine gut metagenome uncultured Neocallimastigales	14		TXT	Sophie Comtet-Marre	Dec 01, 2017
GSE67244	Effect of ferulic acid on Clostridium beijerinckii NCIMB 8052 transcriptome	Expression profiling by array	Clostridium beijerinckii Clostridium beijerinckii NCIMB 8052	16		TXT	Siseon Lee	Mar 25, 2015
GSE12359	Clostridium beijerinckii BA101 mutant fermentation time course	Expression profiling by array	Clostridium beijerinckii Clostridium beijerinckii NCIMB 8052	11		GPR	Zhen Shi	Jun 02, 2009
GSE12365	Clostridium beijerinckii fermentation time course	Expression profiling by array	Clostridium beijerinckii Clostridium beijerinckii NCIMB 8052	21		GPR	Zhen Shi	Jun 02, 2009