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50 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Manihot esculenta
GSE2786	loss of paradormancy in underground adventitious buds of leafy spurge (Euphorbia esula)	Expression profiling by array	Euphorbia esula Manihot esculenta	10		David Horvath	Jun 15, 2005
GSE79526	Widespread natural variation of DNA methylation within angiosperms	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Beta vulgaris Brachypodium distachyon Brassica rapa Cannabis sativa Citrus x clementina Cucumis sativus Erythranthe guttata Eucalyptus grandis Eutrema salsugineum Fragaria vesca Lotus japonicus Malus domestica Manihot esculenta Medicago truncatula Panicum hallii Panicum virgatum Populus trichocarpa Prunus persica Ricinus communis Setaria viridis Sorghum bicolor Theobroma cacao Vitis vinifera	34	TSV SRA Run Selector	Robert J Schmitz	Sep 02, 2016
GSE192748	Whole genome bisulfite sequencing data of cassava	Methylation profiling by high throughput sequencing	Manihot esculenta	14	BW	Zhenhui Zhong	May 27, 2022
GSE72717	Transition from somatic embryo to friable embryogenic callus in cassava: Dynamic changes in cellular structure, physiological status, and gene expression profiles	Expression profiling by high throughput sequencing	Manihot esculenta	3	TXT SRA Run Selector	Qiuxiang Ma	Sep 05, 2015
GSE31073	Transcriptome profiling of low temperature-treated cassava apical shoots reveals dynamic responses of a tropical plant to cold stress	Expression profiling by array	Manihot esculenta	9	TXT	Jun Yang	Jan 17, 2013
GSE156638	Transcriptome of cassava seedling under different treatments	Expression profiling by high throughput sequencing	Manihot esculenta	9	XLS SRA Run Selector	Pingjuan Zhao	Aug 22, 2020
GSE15751	Transcriptome analysis of time couse of leafy spurge infection with Xam	Expression profiling by array	Euphorbia esula Manihot esculenta	36		David Horvath	Aug 15, 2009
GSE63223	Transcriptome analysis of response to infection of cassava anthracnose disease (CAD) using an oligo-DNA microarray from cassava	Expression profiling by array	Manihot esculenta	18	TXT	Tetsuya Sakurai	Dec 31, 2016
GSE225366	Transcriptome analysis of cassava, Manihot esculenta variety TM12	Expression profiling by high throughput sequencing	Manihot esculenta	26	BED BEDGRAPH	Swetha Chenna	May 28, 2024
GSE154948	Transcriptome Analysis of Wild Type and Histone H1.2(MeH1.2) Transgenic Plants by RNA-seq in Cassava.	Expression profiling by high throughput sequencing	Manihot esculenta	9	TXT SRA Run Selector	Pingjuan Zhao	Jul 24, 2020
GSE56467	Transcriptional response of virus-infected cassava and identification of putative sources of resistance for cassava brown streak disease	Expression profiling by high throughput sequencing	Manihot esculenta	4	TXT SRA Run Selector	sophie BOUVAINE	Apr 03, 2014
GSE84715	The histone deacetylase inhibitor Suberoylanilide Hydroxamic Acid (SAHA) alleviates salinity stress in cassava (Manihot esculenta Crantz)	Expression profiling by array	Manihot esculenta	36	TXT	Onsaya Patanun	Dec 01, 2016
GSE52178	Stress acclimation in Cassava	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Manihot esculenta Ricinus communis	10	TSV TXT	Weixiong Zhang	Jul 03, 2014
GSE225365	Strand specific RNA-Seq of transcripts from cassava, Maihot esculenta variety TM12	Expression profiling by high throughput sequencing	Manihot esculenta	8	BEDGRAPH TXT	Swetha Chenna	May 28, 2024
GSE169060	Small RNA profiles of Sri Lankan Cassava Mosaic Virus (SLCMV) infected Cassava plants	Non-coding RNA profiling by high throughput sequencing	Manihot esculenta	3	FA SRA Run Selector	Makeshkumar T	Oct 18, 2023
GSE3913	Seasonal variation in leafy spurge crown bud gene expression	Expression profiling by array	Euphorbia esula Manihot esculenta	9		David Horvath	Dec 29, 2005
GSE8849	Seasonal bud dormancy progression	Expression profiling by array	Euphorbia esula Manihot esculenta	24		David Horvath	Aug 24, 2007
GSE225364	STRIPE-Seq of transcripts from cassava, Maihot esculenta variety TM12	Expression profiling by high throughput sequencing	Manihot esculenta	8	BEDGRAPH	Swetha Chenna	May 28, 2024
GSE98537	RNA-Seq gives insights into genetic regulation of the drought-stress response in the cassava leaves	Expression profiling by high throughput sequencing	Manihot esculenta	4	TXT SRA Run Selector	Yan mei zhu	Jul 01, 2018
GSE114758	RNA polymerase mapping in plants identifies enhancers enriched in causal variants	Expression profiling by high throughput sequencing	Manihot esculenta Zea mays	2	BW SRA Run Selector	Roberto Lozano	Jun 21, 2018