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14 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Lacticaseibacillus rhamnosus
GSE242938	Elemental sulfur enhances the anti-fungal effect of Lacticaseibacillus rhamnosus Lcr35	Expression profiling by high throughput sequencing	Lacticaseibacillus rhamnosus	9		TXT	sylvie miquel	Jan 08, 2024
GSE236782	Phenotypic and transcriptional analysis of the antimicrobial effect of lactic acid bacteria on carbapenem-resistant Acinetobacter baumannii: Lacticaseibacillus rhamnosus CRL 2244 an alternative strategy to fight it	Expression profiling by high throughput sequencing	Acinetobacter baumannii Lacticaseibacillus rhamnosus	6		TXT	Sieira Rodrigo	Sep 14, 2023
GSE158637	Spacer prioritization in CRISPR-Cas9 immunity is enabled by the leader RNA	Other	Escherichia coli Lacticaseibacillus rhamnosus	12		WIG SRA Run Selector	Tom Gräfenhan	Jan 25, 2022
GSE123727	Lactobacillus rhamnosus GG Genomic and Phenotypic Stability in an Industrial Production Process	Genome variation profiling by high throughput sequencing	Lacticaseibacillus rhamnosus	40		FASTA SRA Run Selector	Yun Chen	Mar 02, 2020
GSE58820	Influence of manufacturing processes on cell surface properties of probiotic strain Lactobacillus rhamnosus Lcr35®	Expression profiling by array	Lacticaseibacillus rhamnosus Lactobacillus	9		CALLS PAIR	Stephanie Bornes	Jun 22, 2017
GSE23945	Lactobacillus plantarum IMDO 130201, a wheat sourdough isolate, adapts to growth in wheat sourdough simulation medium at different pH values through differential gene expression	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	10		TXT	Rekin's Janky	Aug 01, 2011
GSE22536	Bile stress response in probiotic Lactobacillus rhamnosus GG	Expression profiling by array	Lacticaseibacillus rhamnosus Lacticaseibacillus rhamnosus GG	12		GPR	Kati Laakso	Jan 01, 2011
GSE15686	Meta-transcriptome analysis of a natural wheat sourdough ecosystem during a 10-day spontaneous laboratory fermentation	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	9		TXT	Rekin's Janky	Jul 07, 2010
GSE15691	Meta-transcriptome analysis of a natural spelt sourdough ecosystem during a 10-day spontaneous laboratory fermentation	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	7		TXT	Rekin's Janky	Jul 07, 2010
GSE15692	Meta-transcriptome analysis of a natural spelt sourdough ecosystem during a 10-day spontaneous laboratory fermentation.	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	9		TXT	Rekin's Janky	Jul 07, 2010
GSE15693	Meta-transcriptome analysis of a natural wheat sourdough ecosystem during a 10-day spontaneous, laboratory fermentation	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	9		TXT	Rekin's Janky	Jul 07, 2010
GSE15803	Analysis of natural wheat and spelt sourdough ecosystem during a 10-day spontaneous laboratory fermentation	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	34		TXT	Rekin's Janky	Jul 07, 2010
GSE9082	DNA validation of LAB 2k v2	Genome variation profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	40		TXT	Rekin's Janky	Oct 20, 2009
GSE9140	RNA validation of LAB 2k v2	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	20		TXT	Rekin's Janky	Oct 20, 2009