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9 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Agaricus bisporus
GSE112636	Diversity of cytosine methylation across the fungi tree of life	Third-party reanalysis Methylation profiling by high throughput sequencing	Agaricus bisporus Aspergillus flavus Aureobasidium pullulans Botrytis cinerea Candida albicans Clavispora lusitaniae Coemansia reversa Coemansia spiralis Coprinopsis cinerea Cordyceps militaris Cryptococcus neoformans var. grubii Flammula alnicola Fusarium fujikuroi Hesseltinella vesiculosa Heterobasidion irregulare Kirkomyces cordensis Laccaria bicolor Lobosporangium transversale Metarhizium robertsii Microbotryum lychnidis-dioicae Mixia osmundae Neurospora crassa Parasitella parasitica Phanerodontia chrysosporium Phycomyces blakesleeanus Plenodomus lingam Pleurotus ostreatus Podospora anserina Postia placenta Pseudogymnoascus destructans Pyricularia oryzae KJ201 Radiomyces spectabilis Saccharomyces cerevisiae Spinellus fusiger Sporobolomyces roseus Syncephalis fuscata Tilletiopsis washingtonensis Uncinocarpus reesii Wolfiporia cocos [Candida] auris	31		TSV TXT XLS SRA Run Selector	Robert J Schmitz	Feb 18, 2019
GSE169088	3D genomics across the tree of life reveals condensin II as a determinant of architecture type	Other	Acropora millepora Aedes aegypti Agaricus bisporus Aplysia californica Arachis hypogaea Branchiostoma lanceolatum Caenorhabditis elegans Chiloscyllium punctatum Ciona intestinalis Clonorchis sinensis Cristatella mucedo Culex quinquefasciatus Drosophila melanogaster Gallus gallus Homo sapiens Hypsibius dujardini Lethenteron camtschaticum Muntiacus muntjak Muntiacus reevesi Notamacropus eugenii Pleurobrachia bachei Pygocentrus nattereri Python bivittatus Saccharomyces cerevisiae Strongylocentrotus purpuratus Triticum aestivum Xenopus laevis	32		BEDPE FASTA HIC VCF WIG SRA Run Selector	Olga Dudchenko	Apr 23, 2021
GSE179468	Functional characterization of the transcription programs underlying phase transition in the BSL3 pathogen Coccidioides immitis	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Agaricus bisporus Coccidioides immitis Saccharomyces cerevisiae Schizosaccharomyces pombe	27		GTF TXT SRA Run Selector	Christopher Benner	Jan 05, 2022
GSE65800	Uncovering the abilities of Agaricus bisporus to degrade plant biomass throughout its life cycle	Expression profiling by high throughput sequencing	Agaricus bisporus	12		TXT SRA Run Selector	miaomiao Zhou	Sep 23, 2015
GSE99928	The physiology of Agaricus bisporus in semi-commercial compost cultivation appears to be highly conserved among unrelated isolates	Expression profiling by high throughput sequencing	Agaricus bisporus	16		TXT SRA Run Selector	Ronald de Vries	May 22, 2018
GSE124976	Agaricus bisporus respiratory bursts	Expression profiling by high throughput sequencing	Agaricus bisporus	9		DIFF SRA Run Selector	Robert-Jan Bleichrodt	Feb 24, 2021
GSE13977	Expression of lignin-degrading enzymes in soils using targeted microarrays	Expression profiling by array	Agaricus bisporus Botrytis cinerea Coriolopsis gallica Cryphonectria parasitica Dichomitus squalens Fusarium oxysporum Fusarium proliferatum Gelatoporia subvermispora Heterobasidion annosum Lentinula edodes Neurospora crassa Phanerodontia chrysosporium Phlebia radiata Pleurotus eryngii Pleurotus ostreatus Schizophyllum commune Trametes cinnabarina Trametes coccinea Trametes versicolor synthetic construct unidentified	68		TXT	Katrina M Waters	Jun 01, 2009
GSE70464	Gene expression changes with viral infection in Agaricus bisporus	Expression profiling by array	Agaricus bisporus	32		TXT	KERRY STEVEN BURTON	Sep 14, 2015
GSE73010	Vitamin B2 and drought stress responses in Agaricus bisporus	Expression profiling by array	Agaricus bisporus	8		TXT	Alfons R Weig	Mar 14, 2018