GEO Browser - GEO

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62 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Mus musculus		COOL
GSE232881	A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival [C-HiC]	Other	Mus musculus	3	COOL HIC	Marco Osterwalder	Jun 01, 2024
GSE232887	A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BED BW COOL HIC NARROWPEAK	Marco Osterwalder	Jun 01, 2024
GSE250264	EVOLUTIONARY CO-OPTION OF AN ANCESTRAL CLOACAL REGULATORY LANDSCAPE WITH THE EMERGENCE OF DIGITS AND GENITALS [cHiC]	Other	Mus musculus	2	BED COOL TXT	Aurelie Hintermann	Apr 17, 2024
GSE250267	EVOLUTIONARY CO-OPTION OF AN ANCESTRAL CLOACAL REGULATORY LANDSCAPE WITH THE EMERGENCE OF DIGITS AND GENITALS	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Danio rerio Mus musculus	34	BED BW COOL NARROWPEAK TXT	Aurelie Hintermann	Apr 17, 2024
GSE255858	O-GlcNAcylation of CTCF regulates 3D chromatin structure [HiC]	Other	Mus musculus	6	COOL TXT	Zeng Pengguihang	Mar 04, 2024
GSE255897	O-GlcNAcylation of CTCF regulates 3D chromatin structure	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	20	BED BW COOL TXT	Zeng Pengguihang	Mar 04, 2024
GSE227816	Selective compartmentalization in condensin-depleted mitotic chromosomes [Hi-C I]	Other	Mus musculus	24	COOL HIC	Haoyue Zhang	Nov 22, 2023
GSE228395	Selective compartmentalization in condensin-depleted mitotic chromosomes [HiC-C]	Other	Mus musculus	14	COOL HIC	Haoyue Zhang	Nov 22, 2023
GSE228402	Selective compartmentalization in condensin-depleted mitotic chromosomes	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	146	BW COOL HIC	Haoyue Zhang	Nov 22, 2023
GSE229179	Selective compartmentalization in condensin-depleted mitotic chromosomes [Hi-C]	Other	Mus musculus	4	COOL HIC	Haoyue Zhang	Nov 22, 2023
GSE247575	Selective compartmentalization in condensin-depleted mitotic chromosomes [Hi-C II]	Other	Mus musculus	34	COOL HIC	Haoyue Zhang	Nov 22, 2023
GSE218090	Transcription induces context-dependent remodeling of chromatin architecture during differentiation	Other	Mus musculus	25	CIS COOL MAT	Tom Sexton	Oct 26, 2023
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE193009	Hi-C analysis of day 0 3T3-L1 cells transfected with scrambled and Prmt5 siRNA	Other	Mus musculus	4	COOL	Sabriya Syed	Sep 08, 2023
GSE208298	Prmt5-dependent regulation of gene expression and TAD boundary strength during early adipogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	20	BW COOL	Sabriya Syed	Sep 08, 2023
GSE158730	NFI transcription factors regulate zonal olfactory receptor expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	237	BIGWIG BW CIF CLOUPE COOL CSV H5 JSON PNG TIFF TXT SRA Run Selector	Elizaveta Bashkirova	Jun 14, 2023
GSE217144	Foxp3 Orchestrates Reorganization of Chromatin Architecture to Establish Regulatory T Cell Identity [Hi-C]	Other	Mus musculus	33	COOL HIC	Jesse R Dixon	Jun 14, 2023
GSE217147	Foxp3 Orchestrates Reorganization of Chromatin Architecture to Establish Regulatory T Cell Identity	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	75	BED COOL HIC TXT	Jesse R Dixon	Jun 14, 2023
GSE205778	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos [cHi-C]	Other	Mus musculus	20	COOL TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE205780	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos [HiChIP]	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	1	COOL	Lucille Lopez-Delisle	Apr 28, 2023