GEO Browser - GEO

Series

Samples

Platforms

DataSets

94 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter							Apr 28, 2023
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE224905	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos [scRNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	6	CSV RDS	Lucille Lopez-Delisle	Apr 28, 2023
GSE211899	A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BW	Filippo M. RIJLI	Apr 28, 2023
GSE211900	A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BW	Filippo M. RIJLI	Apr 28, 2023
GSE211901	A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest [Hi-C]	Other	Mus musculus	8	HIC	Filippo M. RIJLI	Apr 28, 2023
GSE211902	A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest [PCHi-C]	Other	Mus musculus	14	TXT	Filippo M. RIJLI	Apr 28, 2023
GSE211903	A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest [RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	21	BW CSV	Filippo M. RIJLI	Apr 28, 2023
GSE222907	ATAC-seq of in vitro differentiated naïve, Th1, and Th9 cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	18	BW	Daniella Schwartz	Apr 28, 2023
GSE222910	ATAC-seq, ChIP-seq and RNA-seq of in vitro differentiated naïve, Th1, and Th9 cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	110	BED BW	Daniella Schwartz	Apr 28, 2023
GSE186810	Absence of the proprotein convertase FURIN in in vitro activated CD8+ T cells (+/- TGFB1 or IL12) modifies the transcriptome of the cells	Expression profiling by high throughput sequencing	Mus musculus	30	TSV XLSX SRA Run Selector	Markus Juhani Tapani Ojanen	Apr 28, 2023
GSE186812	Absence of the proprotein convertase FURIN in naive CD8+ T cells modifies the transcriptome of the cells	Expression profiling by high throughput sequencing	Mus musculus	8	TSV SRA Run Selector	Markus Juhani Tapani Ojanen	Apr 28, 2023
GSE186813	Absence of the proprotein convertase FURIN in naive and in vitro activated CD8+ T cells	Expression profiling by high throughput sequencing	Mus musculus	38		Markus Juhani Tapani Ojanen	Apr 28, 2023
GSE226199	Adult murine intestine epithelial cell chromatin accessibility	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BW	Wendy Huang	Apr 28, 2023
GSE221656	Age-associated DNA methylation changes in Xenopus frogs	Methylation profiling by high throughput sequencing	Xenopus tropicalis	9	TXT	Marco Morselli	Apr 28, 2023
GSE222108	Age-associated DNA methylation changes in Xenopus frogs, and Targeted bisulfite sequencing to profile age-associated DNA methylation changes in Xenopus frogs	Methylation profiling by high throughput sequencing	Xenopus tropicalis	25		Marco Morselli	Apr 28, 2023
GSE205038	Age-dependent immune and lymphatic responses after spinal cord injury	Expression profiling by high throughput sequencing	Mus musculus	392	TAR	Jonathan Kipnis	Apr 28, 2023
GSE209841	Age-dependent immune and lymphatic responses after spinal cord injury [FACS-LECs]	Expression profiling by high throughput sequencing	Mus musculus	384	TSV	Jonathan Kipnis	Apr 28, 2023
GSE203330	Age-dependent immune and lymphatic responses after spinal cord injury [RNA-seq, aged]	Expression profiling by high throughput sequencing	Mus musculus	4	TAR	Jonathan Kipnis	Apr 28, 2023
GSE205037	Age-dependent immune and lymphatic responses after spinal cord injury [RNA-seq, young]	Expression profiling by high throughput sequencing	Mus musculus	4	TAR	Jonathan Kipnis	Apr 28, 2023
GSE230186	Aggregated gene co-expression networks for predicting transcription factor regulatory landscapes in a non-model plant species	Other	Vitis vinifera	4	NARROWPEAK	José Tomás Matus	Apr 28, 2023