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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL9395
GSE23537	modENCODE_White Lab: genome-wide ChIP-chip and ChIP-Seq data	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila yakuba	247		BAR BED BEDGRAPH CEL GFF WIG SRA Run Selector	Kevin P. White	Aug 11, 2010
GSE24449	Genome-wide comparative ChIP-seq data of CTCF and RNA-seq data in Drosophila white prepupa on Illumina Genome Analyzer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila yakuba	21		BED TXT WIG SRA Run Selector	Kevin P. White	Nov 08, 2012
GSE25665	modENCODE_White Lab: genome-wide ChIP data of H3K27me3 from D.pse_E0-4h on Illumina Genome Analyzer.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila pseudoobscura	2		BED BEDGRAPH	Kevin P. White	Feb 15, 2011
GSE25666	modENCODE_White Lab: genome-wide ChIP data of KW3-Psq-D2 from D.pse_E0-4h on Illumina Genome Analyzer.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila pseudoobscura	2		BED BEDGRAPH	Kevin P. White	Feb 15, 2011
GSE25667	modENCODE_White Lab: genome-wide ChIP data of KW3-Trl-D2 from D.pse_E0-4h on Illumina Genome Analyzer.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila pseudoobscura	2		BED BEDGRAPH	Kevin P. White	Feb 15, 2011
GSE25668	modENCODE_White Lab: genome-wide ChIP data of H3K27me3 from D.pse_WPP on Illumina Genome Analyzer.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila pseudoobscura	2		BED BEDGRAPH	Kevin P. White	Feb 15, 2011
GSE49945	Genome-wide comparative ChIP-seq data of H3K27me3 and RNA-seq data in Drosophila white prepupa on Illumina Genome Analyzer	Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila yakuba	4		TXT SRA Run Selector	Kevin White	Aug 17, 2013
GSE19989	mRNA-Seq of head tissue from Drosophila pseudoobscura	Expression profiling by high throughput sequencing	Drosophila pseudoobscura	2		TXT SRA Run Selector	Brian Oliver	Jan 26, 2010
GSE44612	Comparative Validation of the D. melanogaster Encyclopedia of DNA Elements Transcript Models	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila biarmipes Drosophila bipectinata Drosophila elegans Drosophila eugracilis Drosophila ficusphila Drosophila kikkawai Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila rhopaloa Drosophila simulans Drosophila takahashii Drosophila virilis Drosophila yakuba	93		BAM BED RPKM TXT	Brian Oliver	Feb 25, 2013
GSE13677	Drosophila pseudoobscura and Drosophila simulans small RNAs	Non-coding RNA profiling by high throughput sequencing	Drosophila pseudoobscura Drosophila simulans	3		SRA Run Selector	Eugene Berezikov	Nov 24, 2009