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24 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter						Lin XU
GSE147289	Single-Cell RNA-seq analysis of cell lineages in De Novo Root Regeneration	Expression profiling by high throughput sequencing	Arabidopsis thaliana	1	TXT SRA Run Selector	Lin XU	Feb 10, 2022
GSE147296	Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves	Expression profiling by high throughput sequencing	Arabidopsis thaliana	30	TXT SRA Run Selector	Lin XU	Feb 10, 2022
GSE147301	Time-lapse RNA-seq analysis to study transcriptional regulation by early signals in De Novo Root Regeneration in Arabidopsis	Expression profiling by high throughput sequencing	Arabidopsis thaliana	24	TXT SRA Run Selector	Lin XU	Feb 10, 2022
GSE156990	RNA-seq analysis of callus of Arabidopsis WT and wox5-1 wox7-1	Expression profiling by high throughput sequencing	Arabidopsis thaliana	4	TXT SRA Run Selector	Lin XU	Sep 08, 2021
GSE156991	Single-cell RNA-seq analysis of Arabidopsis hypocotyl callus	Expression profiling by high throughput sequencing	Arabidopsis thaliana	1	TSV SRA Run Selector	Lin XU	Sep 08, 2021
GSE156992	Arabidopsis callus	Expression profiling by high throughput sequencing	Arabidopsis thaliana	5	TSV	Lin XU	Sep 08, 2021
GSE178354	RNA-seq analysis of callus of Arabidopsis WT and plt1 plt2	Expression profiling by high throughput sequencing	Arabidopsis thaliana	4	TXT SRA Run Selector	Lin XU	Sep 08, 2021
GSE139160	Transcriptome gene expression analysis of root tip, leaf tip, shoot tip, root (without root tip) and leaf (without leaf tip) from Ceratopteris richardii sporophytes	Expression profiling by high throughput sequencing	Ceratopteris richardii	15	TXT SRA Run Selector	Lin XU	Oct 22, 2019
GSE139165	Transcriptome-wide analysis of wounded region gene expression using detached first-pair rosette leaves before culture (time 0) and 2 day after culture (DAC) from 12-day-old Col-0 seedlings	Expression profiling by high throughput sequencing	Arabidopsis thaliana	4	TXT SRA Run Selector	Lin XU	Oct 22, 2019
GSE134602	Transcriptome analysis of auxin-regulated genes in Ceratopteris richardii sporophytes	Expression profiling by high throughput sequencing	Ceratopteris richardii	6	FA TXT SRA Run Selector	Lin XU	Jul 23, 2019
GSE120418	Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.	Expression profiling by high throughput sequencing	Arabidopsis thaliana	24	TXT SRA Run Selector	Lin XU	Dec 25, 2018
GSE108253	Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0) and 1 day after culture (DAC) from 9-day-old, 12-day-old and 15-day-old Col-0 seedlings	Expression profiling by high throughput sequencing	Arabidopsis thaliana	18	TXT SRA Run Selector	Lin XU	Dec 19, 2018
GSE101321	RNA-seq analysis of gene expression levels duing callus formation on CIM using WT and lbd16-2	Expression profiling by high throughput sequencing	Arabidopsis thaliana	4	XLSX SRA Run Selector	Lin XU	Aug 01, 2017
GSE65377	RNA-seq analysis of rice leaves, nodes and stems	Expression profiling by high throughput sequencing	Oryza sativa	3	XLSX SRA Run Selector	Lin XU	Jan 01, 2017
GSE86869	RNA-seq analysis of gene transcripts during callus formation from the basal part of young rice leaf explants	Expression profiling by high throughput sequencing	Oryza sativa Japonica Group	3	TXT SRA Run Selector	Lin XU	Sep 14, 2016
GSE69388	RNA-seq analysis of Selaginella kraussiana leaf, rhizophore, seedling and stem	Expression profiling by high throughput sequencing	Selaginella kraussiana	4	FA TXT	Lin XU	Feb 09, 2016
GSE74584	Auxin-independent NAC pathway regulates cell wall metabolism in response to explant-specific wounding during regeneration in Arabidopsis I	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2	TXT SRA Run Selector	Lin XU	Dec 31, 2015
GSE74585	Auxin-independent NAC pathway regulates cell wall metabolism in response to explant-specific wounding during regeneration in Arabidopsis II	Expression profiling by high throughput sequencing	Arabidopsis thaliana	3	TXT SRA Run Selector	Lin XU	Dec 31, 2015
GSE74587	Auxin-independent NAC pathway regulates cell wall metabolism in response to explant-specific wounding during regeneration in Arabidopsis	Expression profiling by high throughput sequencing	Arabidopsis thaliana	5	TXT	Lin XU	Dec 31, 2015
GSE57145	Micro-array analysis of WT and AtISWI in callus formation	Expression profiling by array	Arabidopsis thaliana	12	CEL TXT	Lin XU	May 15, 2014