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5089 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					BEDGRAPH
GSE205799	Ethylene-induced flowering in Aechmea fasciata	Genome binding/occupancy profiling by high throughput sequencing	Aechmea fasciata	6	BEDGRAPH	Jiabin Wang	Jun 10, 2022
GSE82063	Comprehensive DNA methylation analysis of the Aedes aegypti genome	Methylation profiling by high throughput sequencing	Aedes aegypti	1	BEDGRAPH SRA Run Selector	Cassandra Falckenhayn	Nov 30, 2017
GSE153497	RNA degradation analysis reveals ribosome dynamics in complex microbiome samples	Other	Alistipes finegoldii Bacillus amyloliquefaciens Bacillus subtilis Caulobacter vibrioides Cryptococcus neoformans Enterococcus faecalis Escherichia coli Hoylesella timonensis Lactiplantibacillus plantarum Limosilactobacillus fermentum Limosilactobacillus reuteri Listeria monocytogenes Parabacteroides merdae Saccharomyces cerevisiae Salmonella enterica Segatella copri Staphylococcus aureus Synechocystis sp. PCC 6803 compost metagenome human feces metagenome	199	BEDGRAPH TXT XLSX SRA Run Selector	Vicent Pelechano	Mar 24, 2023
GSE97451	Identification and Characterization of a Class of MALAT1-like Genomic Loci	Expression profiling by high throughput sequencing	Anolis carolinensis	4	BEDGRAPH SRA Run Selector	Sarah D Diermeier	Jun 08, 2017
GSE218877	5-methyl cytosine profile of Anthoceros agrestis	Methylation profiling by high throughput sequencing	Anthoceros agrestis	2	BEDGRAPH TXT	Tetsuya Hisanaga	Nov 10, 2023
GSE218880	5-methyl cytosine profile and chromatin profile of Anthoceros agrestis	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anthoceros agrestis	20	BEDGRAPH BROADPEAK BW TXT	Tetsuya Hisanaga	Nov 10, 2023
GSE132858	Gene expression in honeybees	Expression profiling by high throughput sequencing	Apis mellifera	9	BEDGRAPH SRA Run Selector	Nigel P Mongan	Jan 21, 2021
GSE54727	Genome-wide profiling of H3K4me3, H3K27me3 H3K27me1 and 5mC enrichment and mRNA levels in young leaves of Arabidopsis lyrata	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis lyrata	12	BED BEDGRAPH TXT SRA Run Selector	François ROUDIER	Feb 03, 2015
GSE14570	Extensive demethylation of repetitive elements during seed development underlies gene imprinting	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Arabidopsis thaliana	10	BEDGRAPH GFF PAIR TXT SRA Run Selector	Jorja Henikoff	Jun 12, 2009
GSE19654	INTACT method for gene expression and chromatin profiling of individual cell types within a tissue	Genome binding/occupancy profiling by genome tiling array Expression profiling by genome tiling array	Arabidopsis thaliana	16	BEDGRAPH DAT GFF PAIR PDF	Jorja Henikoff	Jun 14, 2010
GSE21323	Protein arginine methyltransferase AtPRMT5 is involved in pre-mRNA splicing in Arabidopsis thaliana	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2	BEDGRAPH SRA Run Selector	xiaofeng cao	Oct 07, 2010
GSE24511	Fast forward genetics: mutation mapping and identification using next-generation sequencing and enrichment of bulk segregant pools	Genome variation profiling by high throughput sequencing	Arabidopsis thaliana	10	BEDGRAPH SAM	Michal Mokry	Dec 31, 2010
GSE37680	Genome-wide analysis of the cytosine methylation profile in Arabidopsis thaliana crown galls	Methylation profiling by genome tiling array	Arabidopsis thaliana	6	BED BEDGRAPH CEL	Claus Juergen Scholz	Feb 18, 2013
GSE44635	High-throughput RNA sequencing analysis of WT, rdm16-2 and sta1 mutants	Expression profiling by high throughput sequencing	Arabidopsis thaliana	3	BEDGRAPH SRA Run Selector	Lan Yang	Feb 26, 2013
GSE47722	Maternal siRNAs mediate spatial and temporal regulation of gene expression and seed development in Arabidopsis	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	18	BEDGRAPH TXT SRA Run Selector	Z Jeffrey Jeffrey Chen	Dec 31, 2018
GSE48026	mRNA-Seq of asi1-1, wild-type and MethlyC-Seq of asi1-1	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	3	BEDGRAPH WIG SRA Run Selector	Jian-Kang Zhu	Sep 06, 2013
GSE50486	rrp6l1-2 project	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	5	BEDGRAPH WIG SRA Run Selector	Jian-Kang Zhu	Apr 16, 2014
GSE50636	Genome-wide profiling of H3K4me3 and H3K27me3 enrichment and mRNA levels in young leaves of Arabidopsis thaliana	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	6	BED BEDGRAPH TXT SRA Run Selector	François ROUDIER	Jan 27, 2014
GSE51763	Arabidopsis EDM2 Promotes IBM1 Distal Polyadenylation and Regulates Genome DNA Methylation Patterns [RNA-Seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2	BEDGRAPH SRA Run Selector	Lan Yang	Oct 29, 2013
GSE51764	Arabidopsis EDM2 Promotes IBM1 Distal Polyadenylation and Regulates Genome DNA Methylation Pattern	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	4	BEDGRAPH WIG	Lan Yang	Oct 29, 2013