513 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE146901
3D Genome Analysis Identifies Enhancer Hijacking Mechanism for High-Risk Factors in Human T-Lineage Acute Lymphoblastic Leukemial (T-ALL)
52 Hong Wu Mar 20, 2021
GSE163177
3D Genome of macaque fetal brain reveals evolutionary innovations during primate corticogenesis
18 Yuting Liu Dec 15, 2020
GSE169120
3D chromatin topography of LSK cells with hyperactivated Notch1 and/or Tcf7 knock-out [HiC-seq]
6 Nadine Fournier Jan 21, 2022
GSE214050
3D epigenome architecture orchestrates cis and trans regulation of flowering time in rice [ChIA-PET]
12
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yue li Sep 28, 2022
GSE228247
3D genomic analysis reveals novel enhancer-hijacking caused by complex structural alterations that drive oncogene overexpression
34 Xiaoyang Zhang Apr 01, 2024
GSE169088
3D genomics across the tree of life reveals condensin II as a determinant of architecture type
32 Olga Dudchenko Apr 23, 2021
GSE228246
3D genomics analysis identifies enhancer hijacking caused by structural alterations and extrachromosomal circular DNA formation [HiChIP]
24
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Xiaoyang Zhang Apr 02, 2024
GSE183764
9sCa: MSL2 is an allelic dosage sensor in mammals
244 Asifa Akhtar Aug 10, 2023
GSE160768
A Quantitative Epistasis Framework For Interrogating the Network of Enhancers
58 xueqiu lin Aug 12, 2022
GSE137274
A WIZ/Cohesin/CTCF complex anchors DNA loops to define gene expression and cell identity [Hi-C]
4 Jill Dowen Apr 14, 2020
GSE153574
A cohesin cancer mutation reveals a role for the hinge domain in genome organization and gene expression [Hi-C]
4 Zachary Carico Feb 23, 2021
GSE212234
A common cis-regulatory variant impacts normal-range and disease-associated human facial shape through regulation of PDKCC during chondrogenesis
35 Jaaved Mohammed Jun 23, 2023
GSE212226
A common cis-regulatory variant impacts normal-range and disease-associated human facial shape through regulation of PDKCC during chondrogenesis [HiChIP]
25 Jaaved Mohammed Jun 23, 2023
GSE244618
A comparative atlas of single-cell chromatin accessibility in the human brain
128 Yang Li Oct 04, 2023
GSE86189
A compendium of promoter-centered long-range chromatin interactions in diverse human tissues and cell types
249 Inkyung Jung Jul 31, 2019
GSE143465
A phase separation mechanism underscores development of cancer and aberrant organization of three-dimensional chromatin structure [Hi-C]
8 Douglas H Phanstiel Apr 19, 2021
GSE166177
A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [HiChIP]
6 Eneritz Agirre Jan 28, 2022
GSE193240
A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq II]
4 Eneritz Agirre Jan 28, 2022
GSE193238
A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]
4 Eneritz Agirre Jan 28, 2022
GSE133928
A topological atlas reveals layers of genome reorganization in colorectal cancer
175 Alejandro Reyes Aug 24, 2020