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17301 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					BIGWIG
GSE121158	A Pandas complex adapted for piRNA-guided transposon silencing (RNA-seq)	Expression profiling by high throughput sequencing	Drosophila melanogaster	12	BIGWIG TXT SRA Run Selector	Ming Wang	Aug 09, 2019
GSE130042	A Pandas complex adapted for piRNA-guided transposon silencing and heterochromatin formation	Expression profiling by high throughput sequencing Other	Drosophila melanogaster	16	BIGWIG	Ming Wang	Aug 09, 2019
GSE151901	A Polycomb domain found in committed cells impairs differentiation when introduced into PRC1 in pluripotent cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	161	BIGWIG	Robert Kingston	Oct 11, 2021
GSE151899	A Polycomb domain found in committed cells impairs differentiation when introduced into PRC1 in pluripotent cells (ChIP-seq, CUT&RUN datasets)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	71	BIGWIG TXT SRA Run Selector	Robert Kingston	Oct 11, 2021
GSE225324	A R-loop sensing pathway mediates the relocation of transcribed genes to nuclear pore complexes	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	6	BED BIGWIG	Benoit Palancade	Aug 21, 2023
GSE46807	A TAF4 coactivator function for E proteins that involves enhanced TFIID binding	Expression profiling by high throughput sequencing	Mus musculus	8	BIGWIG TXT SRA Run Selector	Huimin Geng	Jun 06, 2013
GSE104309	A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	36	BIGWIG	Yali XU	Jan 08, 2018
GSE104307	A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BIGWIG SRA Run Selector	Yali XU	Jan 08, 2018
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE144876	A balanced Oct4 protein interaction network is crucial for maintaining pluripotency	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BIGWIG SRA Run Selector	Dong Han	Dec 10, 2021
GSE243114	A bioinformatic pipeline for analysis of M.EcoGII methylation footprint PacBio long-read sequence data	Other	Escherichia coli Saccharomyces cerevisiae	12	BAM BED BIGWIG	David Clark	Mar 15, 2024
GSE117283	A bipartite boundary element restricts UBE3A imprinting to mature neurons	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	12	BIGBED BIGWIG BW NARROWPEAK SRA Run Selector	Justin Cotney	Jan 07, 2019
GSE144475	A chromosomal loop anchor mediates bacterial genome organization	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Bacillus subtilis	30	BIGWIG COOL SRA Run Selector	Gaurav Dugar	Nov 14, 2021
GSE180691	A cohesin traffic pattern genetically linked to gene regulation	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	158	BIGWIG BW	Anne-Laure Valton	Aug 15, 2022
GSE180690	A cohesin traffic pattern genetically linked to gene regulation [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	BED BIGWIG SRA Run Selector	Anne-Laure Valton	Aug 15, 2022
GSE49847	A comparative encyclopedia of DNA elements in the mouse genome	Expression profiling by high throughput sequencing Genome variation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	588	BAM BEDRNAELEMENTS BIGWIG BROADPEAK NARROWPEAK PAIR	ENCODE DCC	Aug 14, 2013
GSE143288	A compendium map of Cis-Regulatory Elements in the Pig Genome and epigenetic comparison with the human Genome	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Sus scrofa	200	BED BEDGRAPH BIGWIG NARROWPEAK SRA Run Selector	Shuhong Zhao	Feb 26, 2021
GSE97761	A context-specific cardiac Beta-catenin and GATA4 interaction influences TCF7L2 occupancy and remodels chromatin driving disease progression in the adult heart [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BIGWIG SRA Run Selector	Laura C Zelarayan	Jan 23, 2018
GSE159648	A coregulator shift, rather than the canonical switch, underlies thyroid hormone action in liver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BIGWIG TSV TXT SRA Run Selector	Mitchell Lazar	Jan 01, 2021
GSE125972	A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	BIGWIG HIC TXT SRA Run Selector	Sylvia C Hewitt	May 08, 2019