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14003 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					BW
GSE140050	Non-canonical base modifications of bacterial origin in a eukaryotic genome [MeDIP-seq]	Methylation profiling by high throughput sequencing	Adineta vaga	4	BED BW SRA Run Selector	Irina Arkhipova	Jan 07, 2022
GSE140052	Non-canonical base modifications of bacterial origin in a eukaryotic genome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Adineta vaga	17	BED BW	Irina Arkhipova	Jan 07, 2022
GSE217591	Chromatin states at homeoprotein loci distinguish axolotl limb segments prior to regeneration [Cut&Tag]	Other	Ambystoma mexicanum	63	BW	Jingkui Wang	Apr 10, 2023
GSE217592	Chromatin states at homeoprotein loci distinguish axolotl limb segments prior to regeneration [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Ambystoma mexicanum	34	BW	Jingkui Wang	Apr 10, 2023
GSE217593	Chromatin states at homeoprotein loci distinguish axolotl limb segments prior to regeneration [RNA-seq]	Expression profiling by high throughput sequencing	Ambystoma mexicanum	16	BW	Jingkui Wang	Apr 10, 2023
GSE217594	Chromatin states at homeoprotein loci distinguish axolotl limb segments prior to regeneration	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Ambystoma mexicanum	113	BW	Jingkui Wang	Apr 10, 2023
GSE79645	Landscape of histone modifications in a sponge reveals the origin of animal cis-regulatory complexity	Genome binding/occupancy profiling by high throughput sequencing	Amphimedon queenslandica	20	BED BW SRA Run Selector	Federico Gaiti	Mar 31, 2017
GSE111068	Early metazoan cell type diversity and the evolution of multicellular gene regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Amphimedon queenslandica Mnemiopsis leidyi Trichoplax adhaerens	10	BW TXT SRA Run Selector	Arnau Sebe-Pedros	Jul 05, 2018
GSE41338	The evolutionary landscape of alternative splicing in vertebrate species	Expression profiling by high throughput sequencing	Anolis carolinensis Gallus gallus Mus musculus Tetraodon nigroviridis Xenopus tropicalis	21	BW TXT SRA Run Selector	Nuno L Barbosa-Morais	Dec 22, 2012
GSE64055	Identifying active cis-regulatory elements during the development of the limbs and external genitalia in the mouse and lizard.	Genome binding/occupancy profiling by high throughput sequencing	Anolis carolinensis Mus musculus	21	BED BW SRA Run Selector	Carlos Rafael Infante	Oct 01, 2015
GSE97367	BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Gene expression profiling in several tetrapod species, bulk tissue RNA-seq)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anolis carolinensis Gallus gallus Homo sapiens Monodelphis domestica Mus musculus Ornithorhynchus anatinus Xenopus tropicalis	197	BW TXT	Diego Cortez	Oct 27, 2017
GSE104457	PITX1 Promotes Chondrogenesis and Myogenesis in Mouse Hindlimbs Through Conserved Regulatory Targets [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Anolis carolinensis	3	BW SRA Run Selector	Jialiang Wang	Feb 14, 2018
GSE104460	PITX1 Promotes Chondrogenesis and Myogenesis in Mouse Hindlimbs Through Conserved Regulatory Targets	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anolis carolinensis Mus musculus	21	BW	Jialiang Wang	Feb 14, 2018
GSE120076	Chromatin changes induced by a Plasmodium falciparum infection in Anopheles gambiae	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anopheles gambiae	14	BW TXT SRA Run Selector	Jose Luis Ruiz Rodriguez	Jan 08, 2019
GSE152924	The regulatory genome of the malaria vector Anopheles gambiae: integrating chromatin accessibility and gene expression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Anopheles gambiae	12	BW XLSX SRA Run Selector	Jose Luis Ruiz Rodriguez	Dec 22, 2020
GSE153778	Two distinct mechanisms for X chromosome dosage compensation in Anopheles and Drosophila [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Anopheles gambiae	12	BW SRA Run Selector	Asifa Akhtar	May 31, 2021
GSE153780	Two distinct mechanisms for X chromosome dosage compensation in Anopheles and Drosophila	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anopheles gambiae Drosophila melanogaster	32	BW	Asifa Akhtar	May 31, 2021
GSE210624	Sex-specific transcriptome of Anopheles gambiae during embryonic development	Expression profiling by high throughput sequencing	Anopheles gambiae	69	BW TSV	Frank Rühle	Jul 25, 2023
GSE210625	SOA confers X chromosome dosage compensation in Anopheles gambiae mosquitoes (RNA-Seq I)	Expression profiling by high throughput sequencing	Anopheles gambiae	9	BW TSV	Frank Rühle	Jul 25, 2023
GSE210626	SOA confers X chromosome dosage compensation in Anopheles gambiae mosquitoes (ATAC-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Anopheles gambiae	12	BW	Frank Rühle	Jul 25, 2023