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60 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					CGMAP
GSE67507	Epigenome-wide association of liver methylation patterns and complex metabolic traits in mice	Methylation profiling by high throughput sequencing	Mus musculus	105	CGMAP SRA Run Selector	Luz Orozco	Apr 02, 2015
GSE70364	Perturbed neonatal size is associated with differential DNA methylation and gene expression in human placentas	Methylation profiling by high throughput sequencing	Homo sapiens	17	CGMAP SRA Run Selector	Wen-Wei Liao	Jun 30, 2015
GSE72295	A high-throughput screen of inactive X chromosome reactivation identifies the enhancement of DNA demethylation by 5-aza-2’-dC upon inhibition of ribonucleotide reductase-wide	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	28	CGMAP SRA Run Selector	Kathrin Plath	Aug 25, 2015
GSE77019	The non-CG methylation is cell-type specific and conserved between human and mouse [Third-party reanalysis]	Methylation profiling by high throughput sequencing Third-party reanalysis	Homo sapiens Mus musculus		CGMAP XLS	Weilong Guo	Sep 01, 2016
GSE78939	Epigenetic Analysis of Eµ-Myc B-cell lymphoma using both H3K27me3 CHiP-Seq and Bisulfite-Seq (reduced representation).	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	10	BED CGMAP SRA Run Selector	Larry Lam	Mar 08, 2016
GSE79619	DNA Methylation profile in hypothalamus for mouse offspring with maternal high fat (HF), low protein (LP) and control (CO) diets	Methylation profiling by high throughput sequencing	Mus musculus	9	CGMAP SRA Run Selector	Xia Yang	Jan 01, 2019
GSE81407	Deubiquitinating Enzyme OTU5 Contributes to DNA Methylation Patterns and Is Critical for Phosphate Nutrition Signals	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	36	BW CGMAP TXT SRA Run Selector	Pao-Yang Chen	Nov 02, 2017
GSE82138	Dynamics of the transcriptome and methylome during the regeneration of rice	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Oryza sativa Indica Group Oryza sativa Japonica Group	20	CGMAP XLSX SRA Run Selector	Moloya Gohain	Jun 01, 2017
GSE83510	Novel features of telomeres biology revealed by the absence of telomeric DNA methylation	Methylation profiling by high throughput sequencing	synthetic construct	8	CGMAP WIG SRA Run Selector	matteo pellegrini	Jun 21, 2016
GSE84490	RRBS and RNA-seq profiling of maize shoot and tassel primordium	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Zea mays	6	CGMAP TXT SRA Run Selector	Fei-Man Hsu	Aug 07, 2017
GSE87235	Human naïve pluripotent stem cells exhibit X chromosome dampening and X-inactivation (RRBS)	Methylation profiling by high throughput sequencing	Homo sapiens	8	CGMAP SRA Run Selector	Kathrin Plath	Oct 21, 2016
GSE87239	Human naive pluripotent stem cells exhibit X chromosome dampening and X-inactivation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	310	CGMAP TXT	Kathrin Plath	Oct 21, 2016
GSE88932	Human embryonic stem cells do not change their X-inactivation status during differentiation [RRBS-Seq]	Methylation profiling by high throughput sequencing	Homo sapiens	44	CGMAP SRA Run Selector	Kathrin Plath	Jan 26, 2017
GSE88933	Human embryonic stem cells do not change their X-inactivation status during differentiation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	85	CGMAP	Kathrin Plath	Jan 26, 2017
GSE103859	Estimating DNA methylation heterogeneity in bisulfite sequencing data	Methylation profiling by high throughput sequencing	Homo sapiens	2	CGMAP SRA Run Selector	Moloya Gohain	Sep 15, 2017
GSE104474	Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Klebsormidium nitens Saccharomyces cerevisiae Symbiodinium kawagutii Symbiodinium sp. clade B	23	CGMAP FASTA TSV SRA Run Selector	Alex de Mendoza	Apr 11, 2018
GSE115838	Genome-wide analyses reveal the coordination between alternative splicing and DNA methylation for light response in plants	Methylation profiling by high throughput sequencing	Arabidopsis thaliana	16	CGMAP SRA Run Selector	Pao-Yang Chen	Jun 15, 2021
GSE116643	H2A.W is essential for silencing of whole genome heterochromatin in Arabidopsis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	50	CGMAP DIFF SRA Run Selector	Paoyang Chen	Dec 31, 2022
GSE118012	Capture of a functionally active Methyl-CpG Binding Domain by an arthropod retrotransposon family	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Strigamia maritima	9	CGMAP TXT SRA Run Selector	Alex de Mendoza	Jun 17, 2019
GSE120547	A temporal transcriptome and methylome in human embryonic stem cell-derived cardiomyocytes identifies novel regulators of early cardiac development	Methylation profiling by high throughput sequencing	Homo sapiens	4	CGMAP SRA Run Selector	Matteo Pellegrini	Sep 28, 2018