GEO Browser - GEO

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306 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					COV
GSE106806	DNA methylation regulates the neonatal CD4+ T-cell response to pneumonia in mice	Methylation profiling by high throughput sequencing	Mus musculus	12	COV SRA Run Selector	Benjamin D. Singer	Jun 04, 2018
GSE185550	5mC oxidation products in the nucleic acids of the Basidiomycete fungi Laccaria bicolor and Coprinopsis cinerea	Methylation profiling by high throughput sequencing	Coprinopsis cinerea Laccaria bicolor	27	COV SRA Run Selector	Kotryna Kvederaviciute	Jan 16, 2022
GSE117728	A DNMT3A PWWP mutation leads to methylation of bivalent chromatin and postnatal growth retardation in mice	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	79	COV TXT SRA Run Selector	Felix Krueger	Mar 18, 2019
GSE222335	A Molecular Signature Defining Exercise Adaptation and In Vivo Reprogramming in Skeletal Muscle	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	COV	Kevin Murach	Dec 01, 2023
GSE222330	A Molecular Signature Defining Exercise Adaptation and In Vivo Reprogramming in Skeletal Muscle [BiSulfite-seq]	Methylation profiling by high throughput sequencing	Mus musculus	7	COV	Kevin Murach	Dec 01, 2023
GSE128053	A homeostasis hypothesis of avian influenza resistance in chickens	Methylation profiling by high throughput sequencing	Gallus gallus	8	COV SRA Run Selector	Jing An	Mar 15, 2019
GSE245424	A maternal-effect Padi6 variant results in abnormal nuclear localization of DNMT1 and failure of epigenetic reprogramming and zygotic genome activation in mouse embryos [scBS-seq]	Methylation profiling by high throughput sequencing	Mus musculus	96	COV	Francesco Cecere	Oct 18, 2023
GSE245426	A maternal-effect Padi6 variant results in abnormal nuclear localization of DNMT1 and failure of epigenetic reprogramming and zygotic genome activation in mouse embryos.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	193	COV VCF	Francesco Cecere	Oct 18, 2023
GSE109545	A novel role of Tet1/2 proteins in cell cycle progression of trophoblast stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	15	BED COV CSV SRA Run Selector	Myriam Hemberger	May 02, 2018
GSE121141	A whole lifespan mouse multi-tissue DNA methylation clock	Methylation profiling by high throughput sequencing	Mus musculus	81	COV SRA Run Selector	Vadim Gladyshev	Nov 20, 2018
GSE167967	ATAC-seq of Multiple Myeloma	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	COV TXT SRA Run Selector	Benjamin G Barwick	Mar 03, 2021
GSE152349	Ablation of DNA-methyltransferase 3A in skeletal muscle does not affect energy metabolism or exercise capacity	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	75	COV	Lars Roed Ingerslev	Jan 25, 2021
GSE152348	Ablation of DNA-methyltransferase 3A in skeletal muscle does not affect energy metabolism or exercise capacity [RRBS]	Methylation profiling by high throughput sequencing	Mus musculus	50	COV CSV SRA Run Selector	Lars Roed Ingerslev	Jan 25, 2021
GSE107580	Activation of neuronal genes via LINE-1 elements upon global DNA demethylation in human neural progenitors	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	28	BW COV TXT SRA Run Selector	Per Brattas	May 29, 2019
GSE156409	Age-associated cryptic transcription in mammalian stem cells is linked to permissive chromatin at cryptic promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	52	BED BW COV TXT	Weiwei Dang	Jul 15, 2021
GSE168063	Age-associated cryptic transcription in mammalian stem cells is linked to permissive chromatin at cryptic promoters [WGBS]	Methylation profiling by high throughput sequencing	Homo sapiens	2	COV SRA Run Selector	Weiwei Dang	Jul 15, 2021
GSE121437	Ageing affects DNA methylation and transcriptional cell-to-cell variability in muscle stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	1043	COV	Felix Krueger	Aug 22, 2019
GSE121436	Ageing affects DNA methylation and transcriptional cell-to-cell variability in muscle stem cells [scBS-seq]	Methylation profiling by high throughput sequencing	Mus musculus	275	COV SRA Run Selector	Felix Krueger	Aug 22, 2019
GSE151543	Aging imparts cell-autonomous dysfunction to regulatory T cells during recovery from influenza pneumonia	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	COV	Benjamin D. Singer	Feb 18, 2021
GSE151541	Aging imparts cell-autonomous dysfunction to regulatory T cells during recovery from influenza pneumonia [DNA methylation/RRBS]	Methylation profiling by high throughput sequencing	Mus musculus	12	COV SRA Run Selector	Benjamin D. Singer	Feb 18, 2021