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5297 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					GPR
GSE17067	A quantitative model of transcription regulation reveals the role of non-conserved enhancers	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BED CEL GPR TXT SRA Run Selector	Kenzie MacIsaac	May 13, 2010
GSE22276	Genome-wide maps of histone modifications in Arabidopsis thaliana	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Arabidopsis thaliana	20	BED GPR SRA Run Selector	Misook Ha	Feb 02, 2011
GSE28115	CBX3 Regulates Efficient RNA Processing Genome Wide	Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	39	BED BEDGRAPH GFF GPR PAIR SRA Run Selector	Bing Ren	May 24, 2012
GSE29528	Post-transcription initiation function of the ubiquitous SAGA complex in tissue-specific gene activation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Drosophila melanogaster	19	BED BEDGRAPH GPR	Chris W Seidel	Aug 22, 2011
GSE32113	microRNA Targetome Analysis of Latently KSHV-infected Primary Effusion Lymphoma Cell lines Using PAR-CLIP	Expression profiling by array Non-coding RNA profiling by high throughput sequencing Third-party reanalysis	Homo sapiens	20	BED CEL GPR	Eva Gottwein	Nov 16, 2011
GSE41603	Wapl controls higher-order chromatin structure in interphase chromosomes	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BED GPR TXT	Roman R Stocsits	Aug 09, 2013
GSE55402	Kin28 Regulates the Transient Association of Mediator with Core Promoters	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	90	BED GPR	Francois Robert	Mar 24, 2014
GSE61713	HDACs and Phosphorylated Pol II CTD recruit Spt6 for cotranscriptional histone reassembly	Genome binding/occupancy profiling by genome tiling array Expression profiling by RT-PCR	Saccharomyces cerevisiae	28	BED GPR	Chhabi Govind	Sep 25, 2014
GSE81107	Tail and Kinase Modules Differently Regulate Core Mediator Recruitment and Function In Vivo	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	86	BED GPR	Francois Robert	Oct 25, 2016
GSE113025	Histone Recycling by FACT and Spt6 during Transcription Prevents the Scrambling of Histone Modifications [tiling]	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	280	BED GPR XLSX	Francois Robert	Jul 30, 2019
GSE115027	RNA Polymerase II CTD Tyrosine 1 is Required for Efficient Termination by the Nrd1-Nab3-Sen1 Pathway (ChIP-chip)	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	188	BED GPR	Francois Robert	Jan 21, 2019
GSE138062	Actin cytoskeletal remodeling with protrusion formation is essential for heart regeneration in Hippo-deficient mice	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BED BEDGRAPH GPR	Todd Ryan Heallen	Sep 26, 2019
GSE154671	The Deubiquitylase Ubp15 Couples Transcription to mRNA Export	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	15	BED GPR	Francois Robert	Nov 23, 2020
GSE156492	The Histone Variant H2A.Z C-terminal Domain Has Locus- Specific Differential Effects on H2A.Z Occupancy and Nucleosome Localization	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	12	BED GPR	Francois Robert	Aug 18, 2022
GSE225348	Yeast zinc cluster proteins paralogs involved in the switch from fermentation to respiration show interdependency for DNA binding revealing a novel type of DNA recognition	Genome binding/occupancy profiling by array	Saccharomyces cerevisiae	8	BED GPR	Francois Robert	Feb 05, 2024
GSE25899	Paternally-induced transgenerational environmental reprogramming of metabolic gene expression in mammals	Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by array	Mus musculus	42	BEDGRAPH CEL GPR TXT	naomi habib	Jan 14, 2011
GSE62154	A multi-protein occupancy map of the mRNP on the 3' end of histone mRNAs	Other	Homo sapiens	27	BEDGRAPH GPR	Michael Whitfield	Dec 16, 2015
GSE97984	The histone variant H2A.Z promotes splicing of weak introns	Expression profiling by array Other Genome binding/occupancy profiling by high throughput sequencing	Schizosaccharomyces pombe	32	BEDGRAPH GPR	Kelly Nissen	Aug 22, 2017
GSE126884	Repression of germline genes in C. elegans somatic tissues by H3K9 dimethylation of their promoters	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	91	BEDGRAPH BROADPEAK GFF GPR NARROWPEAK PAIR WIG	Lisa N. Petrella	Feb 22, 2019
GSE113270	Histone Recycling by FACT and Spt6 during Transcription Prevents the Scrambling of Histone Modifications	Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	316	BIGWIG GPR	Francois Robert	Jul 30, 2019