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3265 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					NARROWPEAK
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE185066	Local euchromatin enrichment in lamina-associated domains anticipates their re-positioning in the adipogenic lineage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	82	BED BEDGRAPH BROADPEAK BW NARROWPEAK TXT SRA Run Selector	Philippe Collas	Mar 21, 2022
GSE242677	New Drosophila promoter-associated architectural protein Mzfp1 interacts with CP190 and is required for housekeeping gene expression and insulator activity [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	23	BEDGRAPH NARROWPEAK	Natalia Klimenko	Jul 17, 2024
GSE230234	Pre-Hypertrophic Chondrogenic Enhancer Landscape of Limb and Axial Skeleton Development [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW NARROWPEAK	Guillaume Andrey	May 11, 2023
GSE76224	Single-cell epigenomic variability reveals functional cancer heterogeneity	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BW NARROWPEAK SRA Run Selector	Howard Chang	Dec 12, 2016
GSE244758	The Transcription factor NF-YA is Crucial for Neural Progenitor Maintenance during Brain Development	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BEDGRAPH NARROWPEAK	Tomoyuki Yamanaka	Jan 11, 2024
GSE184611	(R)-2-hydroxyglutarate inhibits KDM5 histone lysine demethylases to drive tumorigenesis in IDH-mutant cancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	59	NARROWPEAK TXT SRA Run Selector	Julie-Aurore E Losman	Mar 01, 2023
GSE233467	2-hydroxypropyl-beta-cyclodextrin treatment induces modest immune activation in healthy rhesus macaques	Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	31	BW NARROWPEAK	Jason Brenchley	Jun 12, 2023
GSE233449	2-hydroxypropyl-beta-cyclodextrin treatment induces modest immune activation in healthy rhesus macaques [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	16	BW NARROWPEAK	Jason Brenchley	Jun 12, 2023
GSE163177	3D Genome of macaque fetal brain reveals evolutionary innovations during primate corticogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	18	BED BEDPE BW HIC NARROWPEAK TXT SRA Run Selector	Yuting Liu	Dec 15, 2020
GSE137771	3D chromosome structure reveals unique signatures involved in mouse female germline stem cells and their development	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	NARROWPEAK TXT SRA Run Selector	Ji Wu	Jan 20, 2022
GSE214264	3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	101	BROADPEAK BW CSV NARROWPEAK NCC TSV TXT	David Lando	Jan 19, 2024
GSE144034	5-hydroxymethylation highlights the heterogeneity in keratinization and cell junctions in head and neck cancers	Methylation profiling by high throughput sequencing	Homo sapiens	72	NARROWPEAK SRA Run Selector	Siyu Liu	Sep 01, 2020
GSE151818	5-hydroxymethylcytosine is Dynamically Regulated During Forebrain Organoid Development and Prematurely Altered in Forebrain Organoids of Alzheimer’s Disease Patients	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	48	BED DIFF NARROWPEAK SRA Run Selector	Janise Nichole Kuehner	Apr 27, 2021
GSE213207	5hmC and m6a modification and Translatomes of monocytes and macrophages	Other	Homo sapiens	52	BW NARROWPEAK	RENHUA SONG	Feb 07, 2024
GSE213203	5hmC modification of monocytes and macrophages	Other	Homo sapiens	24	BW NARROWPEAK	RENHUA SONG	Feb 07, 2024
GSE158870	923 enhancer deletion newborn mouse	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	28	NARROWPEAK TXT	Cristina de Guzman Strong	Oct 30, 2020
GSE221771	A COMPASS histone H3K4 trimethyltransferase pentamer transactivates drought tolerance and growth/biomass production in Populus trichocarpa	Genome binding/occupancy profiling by high throughput sequencing	Populus trichocarpa	12	BW NARROWPEAK	Baofeng Zhang	Dec 17, 2023
GSE269169	A CRISPR/Cas9 screen in embryonic stem cells reveals that Mdm2 regulates totipotency exit [CUT&Tag]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BIGWIG BW NARROWPEAK	Qingxiang Gao	Jul 01, 2024
GSE175850	A Characterization of the Chromatin Landscape and the Glucocorticoid Receptor Cistrome in Mouse Cerebral Cortical Embryonic Neural Stem and Progenitor Cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BW NARROWPEAK SRA Run Selector	Donald B. DeFranco	May 25, 2022