GEO Browser - GEO

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23 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					SRA Run Selector		Jul 18, 2017
GSE60209	p53 is essential for DNA methylation homeostasis in naïve embryonic stem cells, and its loss promotes clonal heterogeneity	Methylation profiling by high throughput sequencing	Mus musculus	39	TXT SRA Run Selector	Moshe Oren	Jul 18, 2017
GSE69162	MLL4 prepares the enhancer landscape for FoxP3 induction via chromatin looping	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	27	BED TXT SRA Run Selector	Gangqing Hu	Jul 18, 2017
GSE71564	Genome-wide dynamics of H3K27me3 and H3K4me3 during early flower development [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	22	CSV SRA Run Selector	Wolfgang Werr	Jul 18, 2017
GSE71581	Expression profiling during early flower development [RNA-seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	12	CSV SRA Run Selector	Wolfgang Werr	Jul 18, 2017
GSE76271	TRIM28 interacts with EZH2 and SWI/SNF to activate genes that promote mammosphere formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	WIG XLS SRA Run Selector	Yuanxin Xi	Jul 18, 2017
GSE84502	Genome-wide maps of GlcNAc bound proteins and Pho ChIP-seq in Drosophila S2 cells and pupae.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	7	BEDGRAPH SRA Run Selector	David Vocadlo	Jul 18, 2017
GSE87060	Reduced dosage of the chromosome axis factor Red1 selectively disrupts the meiotic recombination checkpoint in Saccharomyces cerevisiae	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	28	WIG SRA Run Selector	Andreas Hochwagen	Jul 18, 2017
GSE88791	Two MicroRNAs and NF-kB Act in a Unique Regulatory Network to Ensure Precision of the Acute Inflammatory Response in Macrophages	Expression profiling by high throughput sequencing	Mus musculus	8	BEDGRAPH SRA Run Selector	Georgi Kolev Marinov	Jul 18, 2017
GSE89431	VDR ChIP-seq in human monocytic THP-1 cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	TDF SRA Run Selector	Carsten Carlberg	Jul 18, 2017
GSE93584	A genome-wide transcriptome and translatome analysis of Arabidopsis transposons identifies a unique and conserved genome expression strategy for Ty1/Copia retroelements	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	17	TXT SRA Run Selector	Stefan Oberlin	Jul 18, 2017
GSE93845	Nuclear mTOR acts as a transcriptional integrator of the androgen signaling pathway in prostate cancer progression [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BEDGRAPH CSV XLSX SRA Run Selector	Etienne Audet-Walsh	Jul 18, 2017
GSE94131	Krox20 hindbrain regulation involves multiple modes of cooperation between cis-acting elements [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BIGWIG SRA Run Selector	Pascale Gilardi-Hebenstreit	Jul 18, 2017
GSE94715	Krox20 hindbrain regulation involves multiple modes of cooperation between cis-acting elements [4C-seq]	Other	Mus musculus	23	BEDGRAPH SRA Run Selector	Pascale Gilardi-Hebenstreit	Jul 18, 2017
GSE97102	Krox20 hindbrain regulation involves multiple modes of cooperation between cis-acting elements [ATAC-seq]	Other	Mus musculus	24	BW SRA Run Selector	Pascale Gilardi-Hebenstreit	Jul 18, 2017
GSE99884	Dihydropyrimidine-thiones and clioquinol synergize to target b-amyloid cellular pathologies through a metal-dependent mechanism	Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	8	XLSX SRA Run Selector	Dan Tardiff	Jul 18, 2017
GSE100432	Resolving systematic errors in widely-used enhancer activity assays in human cells enables genome-wide functional enhancer characterization.	Other	Homo sapiens	29	BW TSV SRA Run Selector	Alexander Stark	Jul 18, 2017
GSE101343	RNA sequencing to compare gene expession in hepatic stellate cells on a soft (400 Pa) and stiff (25000 Pa) polyacrylamide hydrogels	Expression profiling by high throughput sequencing	Homo sapiens	5	XLSX SRA Run Selector	Ningling Kang	Jul 18, 2017
GSE101521	Whole-transcriptome brain expression and exon-usage profiling in major depression and suicide	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	86	CSV SRA Run Selector	Spiro Pantazatos	Jul 18, 2017
GSE101528	Stapled peptide inhibitors of RAB25 target context-specific phenotypes in cancer	Expression profiling by high throughput sequencing	Homo sapiens	6	TXT SRA Run Selector	Funda Meric-Bernstam	Jul 18, 2017
GSE101544	Expression profiling of the retina of pde6c, a zebrafish model of retinal degeneration	Expression profiling by high throughput sequencing	Danio rerio	6	TXT SRA Run Selector	Nadejda Beliakova-bethell	Jul 18, 2017