Accession | Title | Series type(s) | Organism(s) | Samples | GDS | Supplementary | Contact | Release date |
---|---|---|---|---|---|---|---|---|
Filter | SRA Run Selector | Stephen Tapscott | ||||||
GSE188926 |
Canine DUXC isoforms and functional similarity to human DUX4 [ChIP-seq]
|
5 | Stephen Tapscott | Dec 03, 2021 | ||||
GSE188927 |
Canine DUXC isoforms and functional similarity to human DUX4 [RNA-seq]
|
12 | Stephen Tapscott | Dec 03, 2021 | ||||
GSE45532 |
Pbx and Prdm1a transcription factors differentially regulate subsets of the fast skeletal muscle program in zebrafish
|
12 |
|
Stephen Tapscott | Mar 28, 2013 | |||
GSE25000 |
Differential genomic targeting of the transcription factor TAL1 in alternate hematopoietic lineages
|
3 | Stephen Tapscott | Oct 30, 2010 | ||||
GSE33838 |
DUX4 activates germline genes, retroelements and immune-mediators: Implications for facioscapulohumeral dystrophy
|
2 | Stephen Tapscott | Jan 03, 2012 | ||||
GSE45883 |
Retroelements and DUX4 Create Primate-specific Promoters for Germline Genes
|
4 |
|
Stephen Tapscott | Oct 01, 2013 | |||
GSE50413 |
Comparison of Genome-Wide Binding of MyoD in Normal Human Myogenic Cells and Rhabdomyosarcomas Identifies Regional and Local Suppression of Promyogenic Transcription Factors (MyoD ChIP-Seq profiling)
|
4 |
|
Stephen Tapscott | Aug 29, 2013 | |||
GSE56787 |
DUX4-induced gene expression is the major molecular signature in FSHD skeletal muscle
|
38 |
|
Stephen Tapscott | Jul 03, 2014 | |||
GSE85461 |
Model systems of DUX4 expression recapitulate the transcriptional profile of FSHD cells
|
8 |
|
Stephen Tapscott | Sep 21, 2016 | |||
GSE87495 |
DUX4-induced dsRNA and MYC mRNA Stabilization Activate Apoptotic Pathways in Human Cell Models of Facioscapulohumeral Dystrophy
|
6 | Stephen Tapscott | Dec 31, 2016 | ||||
GSE113133 |
Small noncoding RNAs in FSHD2 muscle cells reveal both DUX4- and SMCHD1-specific signatures
|
10 | Stephen Tapscott | May 29, 2018 | ||||
GSE114936 |
DUX4-induced transcripts from pericentric human satellite II repeats form double-stranded RNA [dsRIPseq]
|
18 | Stephen Tapscott | Oct 30, 2019 | ||||
GSE114938 |
DUX4-induced transcripts from pericentric human satellite II repeats form double-stranded RNA [stranded-RNAseq]
|
4 | Stephen Tapscott | Oct 30, 2019 | ||||
GSE115650 |
MRI-informed muscle biopsies correlate MRI with pathology and DUX4 target gene expression in FSHD
|
43 | Stephen Tapscott | Sep 04, 2018 | ||||
GSE119401 |
DUX4-induced histone variants H3.X and H3.Y mark DUX4 target genes for expression (CUT&RUN)
|
8 | Stephen Tapscott | Aug 31, 2019 | ||||
GSE119402 |
DUX4-induced histone variants H3.X and H3.Y mark DUX4 target genes for expression (RNA-seq)
|
15 | Stephen Tapscott | Aug 31, 2019 | ||||
GSE140261 |
Longitudinal measures of RNA expression and disease activity in FSHD muscle biopsies
|
35 | Stephen Tapscott | Feb 25, 2020 | ||||
GSE34906 |
Genetic and epigenetic determinants of neurogenesis and myogenesis [ChIP-seq]
|
9 | Stephen Tapscott | Mar 26, 2012 | ||||
GSE43223 |
Alternate exon switching establishes a tissue-specific transcription factor to mediate temporal activation of gene expression during differentiation
|
4 | Stephen Tapscott | Jun 01, 2013 | ||||
GSE64622 |
Conversion of MyoD to a neurogenic factor: binding site specificity determines lineage [RNA-seq]
|
8 |
|
Stephen Tapscott | Jul 31, 2015 |