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15083 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					TSV
GSE95430	Single cell RNA-seq of eight thousand epithelium cells from the mammary glands of adult mice	Expression profiling by high throughput sequencing	Mus musculus	2	BAI MTX TSV SRA Run Selector	Gordon K Smyth	Nov 20, 2017
GSE103275	Single cell RNA-seq of mouse mammary gland epithelium cells	Expression profiling by high throughput sequencing	Mus musculus	6	BAI MTX TSV	Gordon K Smyth	Nov 20, 2017
GSE199739	NuRD complex recruitment to Thpok mediates CD4+ T cell lineage differentiation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BAI CSV H5 TBI TSV	Remy Bosselut	Jun 10, 2022
GSE212109	Epigenetic regulation of profibrotic macrophages in systemic sclerosis- associated interstitial lung disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	17	BAI BED CSV H5 TBI TSV	Tracy Tabib	Sep 02, 2022
GSE27243	A Transcriptomic Atlas of Mouse Neocortical Layers	Expression profiling by high throughput sequencing	Mus musculus	19	BAM GTF TSV WIG SRA Run Selector	T Grant Belgard	Aug 24, 2011
GSE51334	DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions	Other	Homo sapiens Mus musculus	993	BAM BED BIGWIG BROADPEAK NARROWPEAK PAIR TSV TXT	ENCODE DCC	Nov 20, 2014
GSE148448	Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells	Other	Homo sapiens Mus musculus	27	BAM CSV LOOM TSV TXT SRA Run Selector	Robi D Mitra	Jul 23, 2020
GSE189063	A transcriptional roadblock protects yeast centromeres	Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	16	BAM BW TSV SRA Run Selector	Glennis Amelia Logsdon	Feb 07, 2022
GSE205368	s3-ATAC landscape of GEMM AML-derived CD8 T cells treated in vivo with JQ1 or vehicle	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BAM TSV	Andrew Adey	Jun 05, 2022
GSE234015	Efficacy of antiviral therapy and host-virus interactions visualized using serial liver sampling with fine-needle aspirates	Other	Hepatitis B virus	12	BAM TSV	Adam Gehring	Jun 07, 2023
GSE22626	Topoisomerase II binds nucleosome-free DNA and acts redundantly with Topoisomerase I to enhance recruitment of RNA Pol II in budding yeast	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	15	BAR CEL TSV TXT	Adam S Sperling	Aug 01, 2011
GSE134388	ALKBH5 regulates anti-PD-1 therapy response by modulating lactate and suppressive immune cell accumulation in tumor microenvironment	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	21	BB MTX TSV TXT XLSX SRA Run Selector	Na Li	Aug 10, 2020
GSE146292	Stepwise chromatin and transcriptional acquisition of an intraepithelial lymphocyte program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BB BED BIGWIG H5 MTX NARROWPEAK TSV SRA Run Selector	Tiago Castro	Jan 04, 2021
GSE186937	Interplay between PML NBs and HIRA for H3.3 deposition on transcriptionally active interferon-stimulated genes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BB BW TSV SRA Run Selector	Thomas Simonet	May 30, 2023
GSE233298	Interplay between PML NBs and HIRA for H3.3 deposition on transcriptionally active interferon-stimulated genes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BB BW TSV	Armelle Corpet	May 25, 2023
GSE15780	Interplay between c-Jun and TAp73α/β contributes to the apoptosis-survival balance	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	15	BED TSV TXT SRA Run Selector	Marion Lohrum	Mar 01, 2011
GSE26439	The tumor antigen PRAME is a substrate recognition subunit of a Cul2-based ubiquitin ligase and is associated with active NFY promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	5	BED TSV WIG SRA Run Selector	H.G. Stunnenberg	Jul 29, 2011
GSE27463	Global Analysis of the Immediate Transcriptional Effects of Estrogen Signaling Reveals a Rapid, Extensive, and Transient Response	Expression profiling by high throughput sequencing	Homo sapiens	8	BED TSV SRA Run Selector	W. Lee Kraus	May 06, 2011
GSE35213	T-cell factor 4 and β-catenin chromatin occupancies pattern zonal liver metabolism.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED TSV SRA Run Selector	Philippe Veber	Jan 18, 2014
GSE39502	Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED PDF TSV WIG SRA Run Selector	Sebastien Vigneau	Oct 11, 2013