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102488 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					TXT
GSE119440	Indole signaling at the host-microbiota-pathogen interface	Expression profiling by high throughput sequencing	Escherichia coli O157:H7	4	ASTAR TXT SRA Run Selector	Aman Kumar	Jan 05, 2019
GSE21720	A metabolomics analysis of Salmonella infection	Other	Mus musculus	14	BAF TXT	L. Caetano M. Antunes	Feb 08, 2011
GSE25687	The effect of antibiotic treatment on the intestinal metabolome	Other	Mus musculus	8	BAF TXT	L. Caetano M. Antunes	Feb 08, 2011
GSE31206	Colistin-resistant, lipopolysaccharide-deficient Acinetobacter baumannii responds to lipopolysaccharide loss through increased expression of genes involved in the synthesis and transport of lipoproteins, phospholipids and poly-beta-1,6-N-acetylglucosamine	Expression profiling by high throughput sequencing	Acinetobacter baumannii	4	BAI BAM TXT SRA Run Selector	Paul Francis Harrison	Aug 11, 2011
GSE33480	RNA-seq from ENCODE/Caltech	Expression profiling by high throughput sequencing	Homo sapiens	24	BAI BAM BIGBED BIGWIG GTF TXT SRA Run Selector	ENCODE DCC	Jul 12, 2012
GSE160390	PEZIC_STAG1_Pluripotency	Expression profiling by high throughput sequencing Other	Mus musculus	33	BAI BAM TXT	Suzana Hadjur	Jun 06, 2021
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE19409	Ligand-dependent dynamics of retinoic acid receptor binding during early neurogenesis	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BAM TXT SRA Run Selector	Shaun Mahony	Dec 10, 2010
GSE19450	Rapid and synchronous clearance of PcG histone modifications from Hox genes anticipates motor neuron differentiation	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Mus musculus	33	BAM TXT	Shaun Mahony	Dec 13, 2012
GSE24012	Transcriptional profiling of EJC depletion by RNA-Seq using the SOLiD platform (Applied Biosystems)	Expression profiling by high throughput sequencing	Drosophila melanogaster	6	BAM TXT WIG SRA Run Selector	Hugo Lavoie	Oct 20, 2010
GSE24565	Small RNA-seq from ENCODE/Cold Spring Harbor Lab	Non-coding RNA profiling by high throughput sequencing	Homo sapiens	87	BAM BEDRNAELEMENTS BIGWIG GTF PDF TXT SRA Run Selector	ENCODE DCC	Oct 08, 2010
GSE26328	DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	53	BAM BIGWIG BROADPEAK NARROWPEAK TXT SRA Run Selector	ENCODE DCC	Dec 29, 2010
GSE27619	Deep sequencing reveals distinct patterns of DNA methylation and transcript isoform regulation in prostate cancer	Expression profiling by array Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	39	BAM TXT	Jung Kim	May 03, 2011
GSE28078	mRNA-Seq of whole flies from Drosophila	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila yakuba	32	BAM RPKM TXT SRA Run Selector	Brian Oliver	Mar 23, 2011
GSE28162	L3MBTL2 protein acts in concert with PcG protein mediated monoubiquitination of H2A to establish a repressive chromatin structure [ChIP-Seq data].	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BAM BIGWIG TXT SRA Run Selector	Philip Cayting	Jun 07, 2011
GSE28782	Chromatin occupancy of TCF7L2 in hepatocytes	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BAM TXT SRA Run Selector	Luke Norton	Sep 12, 2011
GSE29184	A draft map of cis-regulatory sequences in the mouse genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	143	BAM BIGWIG BOWTIE TXT	Bing Ren	Jul 01, 2012
GSE29218	A draft map of cis-regulatory sequences in the mouse genome [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	122	BAM BIGWIG BOWTIE TXT SRA Run Selector	Bing Ren	Jul 01, 2012
GSE29611	Histone Modifications by ChIP-seq from ENCODE/Broad Institute	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	296	BAM BIGWIG BROADPEAK TXT SRA Run Selector	ENCODE DCC	Jun 02, 2011
GSE29719	mRNA-Seq of central cells from the Arabidopsis thaliana female gametophyte	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2	BAM TXT SRA Run Selector	Marc William Schmid	Jan 26, 2012