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3635 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					WIG
GSE98427	Epigenetic activation during Th17 cell differentiation is impaired after TRIM28 deletion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TDF TXT WIG SRA Run Selector	Huiping Lu	Feb 22, 2018
GSE96591	2.5 dpc Uterus Chip-Seq of Kdm4a mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	WIG SRA Run Selector	Aditya Sankar	Aug 17, 2017
GSE107752	35S-SUC2 WT and antisilencing mutants	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	26	WIG	Huang Huan	Dec 06, 2020
GSE69647	3D Chromosome Regulatory Landscape of Human Pluripotent Cells	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	32	WIG	Richard A Young	Nov 21, 2015
GSE69646	3D Chromosome Regulatory Landscape of Human Pluripotent Cells [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	18	WIG SRA Run Selector	Richard A Young	Nov 22, 2015
GSE69692	3D Chromosome Regulatory Landscape of Human Pluripotent Cells [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens	4	WIG SRA Run Selector	Richard A Young	Nov 22, 2015
GSE201205	3D chromatin organization involving MEIS1 factor in the cis-regulatory landscape of GJB2	Other	Homo sapiens	6	RDS WIG	Anaïs LE NABEC	Jul 13, 2022
GSE169088	3D genomics across the tree of life reveals condensin II as a determinant of architecture type	Other	Acropora millepora Aedes aegypti Agaricus bisporus Aplysia californica Arachis hypogaea Branchiostoma lanceolatum Caenorhabditis elegans Chiloscyllium punctatum Ciona intestinalis Clonorchis sinensis Cristatella mucedo Culex quinquefasciatus Drosophila melanogaster Gallus gallus Homo sapiens Hypsibius dujardini Lethenteron camtschaticum Muntiacus muntjak Muntiacus reevesi Notamacropus eugenii Pleurobrachia bachei Pygocentrus nattereri Python bivittatus Saccharomyces cerevisiae Strongylocentrotus purpuratus Triticum aestivum Xenopus laevis	32	BEDPE FASTA HIC VCF WIG SRA Run Selector	Olga Dudchenko	Apr 23, 2021
GSE145904	40S ribosome profiling reveals distinct roles for Tma20/Tma22 (MCT-1/DENR) and Tma64 (eIF2D) in 40S subunit recycling	Other	Saccharomyces cerevisiae	28	WIG SRA Run Selector	Nicholas R Guydosh	Mar 01, 2021
GSE135715	4C analysis of 9p21 interaction network in HEK TE cells	Other	Homo sapiens	8	BED WIG SRA Run Selector	Peihua Zhao	Aug 13, 2019
GSE183006	4C-seq analyses of the 3’Igh locus during B cell development	Other	Mus musculus	16	WIG SRA Run Selector	Amy Kenter	Nov 23, 2021
GSE76054	4C-seq analysis of the c-Kit locus	Other	Mus musculus	6	CSV WIG SRA Run Selector	Beatriz Aranda-Orgilles	Aug 25, 2016
GSE52281	4C-seq indicate interactive sites with the sequence close from Meis2 promoter	Other	Mus musculus	1	BED WIG SRA Run Selector	Takaho A. Endo	Jan 15, 2014
GSE195943	4C-seq protocol in mice macrophages	Other	Mus musculus	2	PNG WIG	Zhiqiang Huang	Apr 14, 2022
GSE182332	4Cseq of OVCA432	Other	Homo sapiens	2	BEDGRAPH WIG SRA Run Selector	Guoli Li	Jan 18, 2022
GSE65860	5-hydroxymethylcytosine dynamics during retinal maturation	Methylation profiling by high throughput sequencing	Mus musculus	5	WIG SRA Run Selector	Arshan Perera	Apr 02, 2015
GSE229473	5P-Seq analysis of wt and new1-knockout yeast strain as well as New1:80S pull-down samples	Other	Saccharomyces cerevisiae	20	WIG	Vasili Hauryliuk	Apr 12, 2023
GSE80831	A Basic Domain in the Histone H2B N-terminal Tail is Important for Nucleosome Assembly by FACT	Genome binding/occupancy profiling by genome tiling array	Saccharomyces cerevisiae	6	CEL WIG	John J. Wyrick	Aug 10, 2016
GSE139521	A CRISPRi system for efficient and rapid gene knockdown in Caulobacter crescentus	Expression profiling by high throughput sequencing	Caulobacter vibrioides	4	WIG SRA Run Selector	Monica S Guo	Jan 23, 2020
GSE154495	A CTCF binding element regulates RA-induced early ESCs differentiation through orchestrating long-range chromatin interactions between its adjacent enhancers and HoxA	Expression profiling by high throughput sequencing Other	Mus musculus	10	TXT WIG SRA Run Selector	Niannian Li	Jul 16, 2020