GEO Browser - GEO

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59 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mus musculus				Mar 31, 2022
GSE192510	Single cell RNA-seq of brain cells in mice lacking Notch3	Expression profiling by high throughput sequencing	Mus musculus	2254	TXT	L. H.	Mar 31, 2022
GSE192585	Single cell RNA-seq of brain macrophages and microglia in mice lacking Notch3	Expression profiling by high throughput sequencing	Mus musculus	629	TXT	L. H.	Mar 31, 2022
GSE189975	H3K9 trimethylation in active compartments optimizes stimulus-regulated transcription by restricting usage of CTCF sites in SINE-B2 repeats	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	80	BW TXT	Francesco Gualdrini	Mar 31, 2022
GSE196458	MicroRNA 3'-compensatory pairing occurs through two binding modes, with affinity shaped by nucleotide identity and position	Non-coding RNA profiling by high throughput sequencing Other	Mus musculus synthetic construct	64		Sean E. McGeary	Mar 31, 2022
GSE199598	CryoGrid-PIXUL-RNA: High throughput RNA isolation platform for tissue transcript analysis	Expression profiling by high throughput sequencing	Mus musculus	48	CSV TXT	Karol Bomsztyk	Mar 31, 2022
GSE189971	H3K9 trimethylation in active compartments optimizes stimulus-regulated transcription by restricting usage of CTCF sites in SINE-B2 repeats [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BW	Francesco Gualdrini	Mar 31, 2022
GSE168448	Atlas of the aging mouse colon	Expression profiling by high throughput sequencing	Mus musculus	33	CSV SRA Run Selector	Seyed Mohammd Mahdi Rasa	Mar 31, 2022
GSE189970	H3K9 trimethylation in active compartments optimizes stimulus-regulated transcription by restricting usage of CTCF sites in SINE-B2 repeats [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BW	Francesco Gualdrini	Mar 31, 2022
GSE199214	The steroid hormone estriol (E3) regulates epigenetic programming of fetal mouse brain and reproductive tract	Expression profiling by array Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	24	BEDGRAPH CEL CHP GFF	Yuping Zhou	Mar 31, 2022
GSE155492	RNPS1 inhibits excessive TNF/TNFR signaling to support hematopoiesis in mice	Expression profiling by high throughput sequencing	Mus musculus	21	XLSX SRA Run Selector	Sara K Hildebrand	Mar 31, 2022
GSE173805	Type 1 calreticulin mutations activate the IRE1α-XBP1 pathway of the unfolded protein response to drive MPN	Expression profiling by high throughput sequencing	Mus musculus	20	CSV SRA Run Selector	Harrison Shea Greenbaum	Mar 31, 2022
GSE198462	Next generation RNAseq from human hepatic sinusoidal endothelial cells (EC) and mouse sinusoidal EC plated on soft vs hard gels	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	18	TSV XLS	Aditya Bhagwate	Mar 31, 2022
GSE154700	BPTF is essential for murine neocortical development	Expression profiling by high throughput sequencing	Mus musculus	16	H5 SF SRA Run Selector	Dave Picketts	Mar 31, 2022
GSE183221	Identification of gene expression alteration in macrophage cells with oncolytic HSV	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	16	TXT SRA Run Selector	Yoshihiro Otani	Mar 31, 2022
GSE184151	Activation of AhR promotes phosphorylation of ARNT isoform 1 as a switch for optimal AhR activity in human T cell malignancies.	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	16	XLSX SRA Run Selector	Kamil Khanipov	Mar 31, 2022
GSE189974	H3K9 trimethylation in active compartments optimizes stimulus-regulated transcription by restricting usage of CTCF sites in SINE-B2 repeats [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	16	BW	Francesco Gualdrini	Mar 31, 2022
GSE199264	Interferons limit autoantigen-specific CD8+ T-cell expansion in the non-obese diabetic mouse	Other	Mus musculus	15	TXT	Nicola Principe	Mar 31, 2022
GSE199546	Time-Course Transcriptome Analysis of Lungs From Mice Infected With Hypervirulent Klebsiella pneumoniae via Aerosolize Intratracheal Inoculation	Expression profiling by high throughput sequencing	Mus musculus	15	XLSX	Xinying Zheng	Mar 31, 2022
GSE196867	Macrophage-produced VEGFC is induced by efferocytosis to resolve inflammation and improve ventricular function after myocardial infarction	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	TXT	Connor Lantz	Mar 31, 2022
GSE171603	Microbiome-dependent tryptophan metabolism suppresses inflammatory immunity in the pancreatic tumor microenvironment by activation of the aryl hydrocarbon receptor	Expression profiling by high throughput sequencing	Mus musculus	12		Andreas Kloetgen	Mar 31, 2022