GEO Browser - GEO

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81 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mus musculus		BAM
GSE33912	Functional Identification of Critical Bmi1 target genes in Neural Progenitor and Malignant Glioma cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	42	XLSX BAM SRA Run Selector	Gaetano Gargiulo	May 21, 2013
GSE32916	Analysis of Pro-Inflammatory Gene Activation and RNA Processing by RNAseq of Nascent Transcripts I	Expression profiling by high throughput sequencing	Mus musculus	15	XLS TXT BAM SRA Run Selector	Stephen Smale	May 03, 2012
GSE33141	Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Nrl-/- Retinal Transcriptomes	Expression profiling by high throughput sequencing	Mus musculus	6	XLS TXT BAM SRA Run Selector	HARSHA KARUR RAJASIMHA	Oct 25, 2011
GSE27243	A Transcriptomic Atlas of Mouse Neocortical Layers	Expression profiling by high throughput sequencing	Mus musculus	19	WIG TSV GTF BAM SRA Run Selector	T Grant Belgard	Aug 24, 2011
GSE29413	DNA methylation and SETDB1/H3K9me3 regulate predominantly distinct sets of genes, retroelements and chimaeric transcripts in mouse ES cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	WIG BAM SRA Run Selector	Eric Chuah	May 21, 2011
GSE30298	Identification and analysis of pancreatic islet specific enhancers	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	WIG TXT BAM SRA Run Selector	Patrick Plettner	Jun 30, 2011
GSE30882	Embryonic stem cell based system for the discovery and mapping of developmental transcriptional programs	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	WIG TXT BED BAM SRA Run Selector	Shaun Mahony	Nov 12, 2011
GSE31456	Transcriptional mechanisms controlling direct motor neuron programming	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	WIG TXT CEL BW BED BAM SRA Run Selector	Shaun Mahony	Jul 04, 2013
GSE31655	Dynamic Changes in Ezh2 Gene Occupancy Underlie Its Involvement in Neural Stem Cell Self-Renewal and Differentiation towards Oligodendrocytes	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	WIG BW BAM SRA Run Selector	Falak Sher	Jul 30, 2012
GSE39435	Induced Cdx2 binding in embryonic stem cells and endodermal cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	WIG BW BAM SRA Run Selector	Shaun Mahony	Mar 27, 2014
GSE51336	Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	266	WIG NARROWPEAK BROADPEAK BIGWIG BED BAM	ENCODE DCC	Nov 20, 2014
GSE51341	Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence	Other	Homo sapiens Mus musculus	32	WIG TXT NARROWPEAK BROADPEAK BIGWIG BED BAM	ENCODE DCC	Nov 19, 2014
GSE19409	Ligand-dependent dynamics of retinoic acid receptor binding during early neurogenesis	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	TXT BAM SRA Run Selector	Shaun Mahony	Dec 10, 2010
GSE19450	Rapid and synchronous clearance of PcG histone modifications from Hox genes anticipates motor neuron differentiation	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Mus musculus	33	TXT BAM	Shaun Mahony	Dec 13, 2012
GSE29184	A draft map of cis-regulatory sequences in the mouse genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	143	TXT BOWTIE BIGWIG BAM	Bing Ren	Jul 01, 2012
GSE29218	A draft map of cis-regulatory sequences in the mouse genome [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	122	TXT BOWTIE BIGWIG BAM SRA Run Selector	Bing Ren	Jul 01, 2012
GSE30199	Base-resolution analyses of parent-of-origin and sequence dependent allele specific DNA methylation in the mouse genome (ChIP-seq and Methyl-seq)	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	10	TXT BED BAM SRA Run Selector	Wei Xie	Feb 15, 2012
GSE31221	TCF7 is a key regulator of the switch of self-renewal and differentiation in a multipotential hematopoietic cell line	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	TXT BED BAM SRA Run Selector	Jiaqian Wu	Mar 30, 2012
GSE32190	Selective Functions of Individual Zinc Fingers Within the DNA-Binding Domain of Ikaros (RNA-seq: Thymocytes)	Expression profiling by high throughput sequencing	Mus musculus	7	TXT SAM BIGWIG BEDGRAPH BAM SRA Run Selector	Hilde Schjerven	Sep 08, 2013
GSE33306	Alternative splicing controlled by heterogeneous nuclear ribonucleoprotein L (hnRNP L) regulates development, proliferation and migration of thymic pre-T cells	Expression profiling by high throughput sequencing	Mus musculus	4	TXT BAM SRA Run Selector	Brian Wilhelm	Apr 24, 2012