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5085 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mus musculus		BED
GSE174554	A single cell atlas of human glioma under therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	113	ZIP TXT TSV TAR MTX BED	Aaron Diaz	Jul 05, 2022
GSE181065	Genome wide mapping of Nr1d1 (Reverb α) binding sites in Th1 (T-helper type 1) cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	ZIP TSV FA COD BED SRA Run Selector	Pawan Gupta	Dec 30, 2022
GSE80280	3D structures of individual mammalian genomes reveal principles of nuclear organization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	XYZ TXT TSV PDB HDF5 BED SRA Run Selector	Andre J Faure	Mar 07, 2017
GSE74278	Transposable elements and their KRAB-ZFP controllers regulate gene expression in adult tissues	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	XML TXT BW BED SRA Run Selector	Julien Duc	Mar 15, 2016
GSE125523	Single-Cell Chromatin Analysis of Mammary Gland Development Reveals Cell-State Transcriptional Regulators and Lineage Relationships	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	XML TXT CSV BED SRA Run Selector	Chi-Yeh Chung	Sep 01, 2019
GSE23719	Dynamic BRG1 Recruitment During T Helper Differentiation And Activation Reveals Distal Regulatory Elements	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	XLSX BEDGRAPH BED SRA Run Selector	Supriyo De	Mar 01, 2011
GSE52386	Rapid and Pervasive Changes in Genome-Wide Enhancer Usage During Mammalian Development	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	48	XLSX WIG BED SRA Run Selector	Alex S Nord	Dec 19, 2013
GSE56617	Dynamics of Genomic H3K27me3 Domains and Role of EZH2 during Pancreatic Endocrine Specification	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	XLSX BW BED SRA Run Selector	Gregory Donahue	Jul 28, 2014
GSE56697	Programming and inheritance of parental DNA methylomes in mammals	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	13	XLSX BED SRA Run Selector	Lu Wang	May 12, 2014
GSE56893	RAR/RXR binding dynamics distinguishes pluripotency from differentiation-associated cis-regulatory elements	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	23	XLSX TXT BED SRA Run Selector	Philippe Veber	Apr 17, 2015
GSE58019	Gene silencing triggers Polycomb Repressive Complex 2 recruitment to CpG islands genome-wide [ChIP-seq_drugs]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	XLSX BED SRA Run Selector	Kristian Helin	Jul 03, 2014
GSE61885	Genome accessibility is widely preserved and locally modulated during mitosis [Dnase-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	XLSX BIGWIG BED SRA Run Selector	Ross Hardison	Oct 01, 2014
GSE61995	m6A mRNA Methylation Facilitates Resolution of Naïve Pluripotency Towards Differentiation (m6a-seq)	Other	Mus musculus	18	XLSX BED SRA Run Selector	Noa Novershtern	Nov 02, 2014
GSE65918	Oct1 and OCA-B are Selectively Required for CD4 Memory T Cell Formation and Function (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	XLSX TDF BED SRA Run Selector	Dean Tantin	Sep 17, 2015
GSE67516	A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	XLSX XLS TXT BW BED SRA Run Selector	John Edward Froberg	Jun 19, 2015
GSE70253	Single-cell chromatin profiles reveal a spectrum of stem cell epigenetic states	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	123	XLSX BED SRA Run Selector	oren ram	Oct 12, 2015
GSE73372	AP-1 family members act at DNA targets in conjunction with Sox9 to promote chondrocyte hypertrophy	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	6	XLSX BED SRA Run Selector	Xinjun He	Feb 29, 2016
GSE74397	N6-methyladenosine-Mediated Nuclear Export of Messenger RNA	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	38	XLSX TXT DIFF BED SRA Run Selector	Ian Roundtree	Oct 12, 2017
GSE79518	The dual role of LSD1 and HDAC3 in STAT5-dependent transcription is determined by protein interactions, binding affinities, motifs and genomic positions [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	XLSX BEDGRAPH BED SRA Run Selector	Aikaterini Nanou	Nov 30, 2016
GSE79882	Genome-wide map of DNA 5-Hydroxymethylcytosine in cardiomyocytes isolated from E14.5, Neonatal, Adult, pressure-overload (TAC), sh-control and sh-TET2 isolated cardiomyocytes	Methylation profiling by high throughput sequencing	Mus musculus	22	XLSX BIGWIG BED SRA Run Selector	Paolo Kunderfranco	Jun 21, 2016