GEO Browser - GEO

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1163 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mus musculus		NARROWPEAK
GSE32218	Histone Modifications by ChIP-seq from ENCODE/Stanford/Yale	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BIGWIG NARROWPEAK SRA Run Selector	ENCODE DCC	Sep 20, 2011
GSE36023	Histone Modifications by ChIP-seq from ENCODE/Caltech	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BIGWIG NARROWPEAK TXT SRA Run Selector	ENCODE DCC	Apr 19, 2012
GSE36024	Transcription Factor Binding Sites by ChIP-seq from ENCODE/Caltech	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BIGWIG NARROWPEAK TXT SRA Run Selector	ENCODE DCC	Apr 13, 2012
GSE36030	Transcription Factor Binding Sites by ChIP-seq from ENCODE/Stanford/Yale	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	85	BIGWIG NARROWPEAK TXT SRA Run Selector	ENCODE DCC	Apr 11, 2012
GSE37074	DNaseI Hypersensitivity by Digital DNaseI from ENCODE/University of Washington	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BIGWIG BROADPEAK NARROWPEAK SRA Run Selector	ENCODE DCC	Oct 03, 2012
GSE40848	DNaseI Hypersensitivity by Digital DNaseI from ENCODE/PSU	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BIGWIG NARROWPEAK SRA Run Selector	ENCODE DCC	Sep 13, 2012
GSE40869	DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Mouse]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BIGWIG BROADPEAK NARROWPEAK SRA Run Selector	ENCODE DCC	Sep 19, 2012
GSE48938	Cohesin is a key determinant of interphase chromosome domain architecture (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	NARROWPEAK SRA Run Selector	Suzana Hadjur	Dec 11, 2013
GSE49847	A comparative encyclopedia of DNA elements in the mouse genome	Expression profiling by high throughput sequencing Genome variation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	588	BAM BEDRNAELEMENTS BIGWIG BROADPEAK NARROWPEAK PAIR	ENCODE DCC	Aug 14, 2013
GSE51334	DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions	Other	Homo sapiens Mus musculus	993	BAM BED BIGWIG BROADPEAK NARROWPEAK PAIR TSV TXT	ENCODE DCC	Nov 20, 2014
GSE51336	Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	266	BAM BED BIGWIG BROADPEAK NARROWPEAK WIG	ENCODE DCC	Nov 20, 2014
GSE51341	Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence	Other	Homo sapiens Mus musculus	32	BAM BED BIGWIG BROADPEAK NARROWPEAK TXT WIG	ENCODE DCC	Nov 19, 2014
GSE55581	Diet-induced chromatin remodeling in mice livers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	20	BED BEDPE DIFF NARROWPEAK SRA Run Selector	Amy Leung	Jul 17, 2014
GSE56312	Ground state conditions induce rapid reorganization of core pluripotency factor binding that precede global epigenetic reprogramming	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	36	NARROWPEAK TDF SRA Run Selector	Michael Johannes Ziller	Aug 05, 2015
GSE60731	Regulation of chromatin accessibility and Zic binding at enhancers in the developing cerebellum	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	63	BED NARROWPEAK TXT SRA Run Selector	Christopher L Frank	Feb 27, 2015
GSE61971	Molecular profiling of mouse Dnmt3a/FLT3-ITD leukemia models	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	BED BW NARROWPEAK TXT	Margaret Goodell	May 19, 2016
GSE63286	Kdm5b depletion in embryonic stem cells does not induce intragenic promoters or affect transcription [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	4	NARROWPEAK TXT SRA Run Selector	Andrew Johnston	Mar 21, 2020
GSE63287	Kdm5b depletion in embryonic stem cells does not induce intragenic promoters or affect transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BEDGRAPH NARROWPEAK TXT	Andrew Johnston	Mar 21, 2020
GSE65159	Conserved epigenomic signatures between mouse and human elucidate immune basis of Alzheimer's disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BW NARROWPEAK TXT SRA Run Selector	Andreas R Pfenning	Feb 18, 2015
GSE65695	Genome-wide binding profiles of nuclear FGFR1, RXRα and Nur77 in pluripotent mouse Embryonic Stem Cells and during Retinoic Acid-induced differentiation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	NARROWPEAK SRA Run Selector	Michal Stachowiak	May 01, 2015