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34340 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mus musculus		TXT
GSE77765	Detection of a Yersinia pestis homologue in rodent samples	Genome variation profiling by array	Yersinia pseudotuberculosis Yersinia pestis Yersinia enterocolitica Toxoplasma gondii Streptobacillus moniliformis Staphylococcus aureus Salmonella enterica subsp. enterica serovar Typhimurium Rickettsia typhi Rickettsia prowazekii Rattus rattus Rattus norvegicus Paslahepevirus balayani Orthohantavirus seoulense Orthohantavirus puumalaense Mycobacterium tuberculosis variant microti Mycobacterium tuberculosis variant bovis Mycobacterium tuberculosis Mycobacterium canetti Mycobacterium avium subsp. paratuberculosis Mycobacterium avium Mus musculus Mammarenavirus choriomeningitidis Leptospira interrogans Francisella tularensis subsp. tularensis Francisella tularensis subsp. novicida Francisella tularensis subsp. mediasiatica Francisella tularensis subsp. holarctica Escherichia coli O157:H7 Cowpox virus Campylobacter jejuni Bartonella quintana Bartonella henselae Apodemus sylvaticus	65	TXT	Tim Giles	Feb 11, 2016
GSE33360	Discovery of novel microRNAs in rat kidney using microarray analyses	Non-coding RNA profiling by array	Xenopus tropicalis Xenopus laevis Tetraodon nigroviridis Takifugu rubripes Taeniopygia guttata Symphalangus syndactylus Sus scrofa Saguinus labiatus Rhinopithecus bieti Rattus norvegicus Pongo pygmaeus Petromyzon marinus Pan troglodytes Pan paniscus Ovis aries Oryzias latipes Ornithorhynchus anatinus Mus musculus Macaca nemestrina Macaca mulatta Homo sapiens Gallus gallus Equus caballus Danio rerio Canis lupus familiaris Bos taurus Ateles geoffroyi	6	TXT	Fanxue Meng	Nov 02, 2011
GSE41338	The evolutionary landscape of alternative splicing in vertebrate species	Expression profiling by high throughput sequencing	Xenopus tropicalis Tetraodon nigroviridis Mus musculus Gallus gallus Anolis carolinensis	21	BW TXT SRA Run Selector	Nuno L Barbosa-Morais	Dec 22, 2012
GSE43520	The evolution of lncRNA repertoires and expression patterns in tetrapods	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Xenopus tropicalis Ornithorhynchus anatinus Mus musculus Monodelphis domestica Macaca mulatta Homo sapiens Gorilla gorilla Gallus gallus	55	BEDGRAPH TXT SRA Run Selector	Anamaria Necsulea	Jan 19, 2014
GSE68087	Active DNA demethylation at enhancers during the vertebrate phylotypic period	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Xenopus tropicalis Mus musculus Danio rerio	30	BED TXT SRA Run Selector	Ozren Bogdanovic	Jan 29, 2016
GSE97367	BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Gene expression profiling in several tetrapod species, bulk tissue RNA-seq)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Xenopus tropicalis Ornithorhynchus anatinus Mus musculus Monodelphis domestica Homo sapiens Gallus gallus Anolis carolinensis	197	BW TXT	Diego Cortez	Oct 27, 2017
GSE23963	Hybridization of human oocyte cDNA library on the multi-species oocyte array to assess for gene conservation using a temperature stringency criteria	Expression profiling by array	Xenopus laevis Mus musculus Homo sapiens Bos taurus	6	TXT	Eve-Lyne Sylvestre	Dec 15, 2010
GSE36617	Contribution of molecular actors from somatic origin to oocyte developmental competence acquisition, lessons from evolution	Expression profiling by array	Xenopus laevis Oncorhynchus mykiss Mus musculus Bos taurus	75	TXT	Julien Bobe	Oct 14, 2012
GSE39673	Geminin regulates the transcriptional and epigenetic status of neuronal fate promoting genes during mammalian neurogenesis	Expression profiling by high throughput sequencing Expression profiling by array	Xenopus laevis Mus musculus	10	CEL TXT	Kristen L Kroll	Dec 06, 2012
GSE52809	Poly(A)-tail profiling reveals an embryonic switch in translational control	Expression profiling by high throughput sequencing	Xenopus laevis Schizosaccharomyces pombe Saccharomyces cerevisiae Mus musculus Homo sapiens Drosophila melanogaster Danio rerio Arabidopsis thaliana	64	TXT SRA Run Selector	Stephen Eichhorn	Jan 29, 2014
GSE87872	Gene resistance to transcriptional reprogramming following nuclear transfer is directly mediated by multiple chromatin repressive pathways	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Xenopus laevis Mus musculus	48	BW TXT SRA Run Selector	Charles Bradshaw	Jun 12, 2017
GSE166544	The molecular basis of coupling between poly(A)-tail length and translational efficiency	Expression profiling by high throughput sequencing Other	Xenopus laevis Mus musculus Homo sapiens	79	TXT SRA Run Selector	David Bartel	Jul 07, 2021
GSE58388	Contribution of Veillonella parvula to Pseudomonas aeruginosa mediated pathogenicity in a murine tumor model system	Expression profiling by high throughput sequencing	Veillonella parvula DSM 2008 Pseudomonas aeruginosa PA14 Mus musculus	12	TXT SRA Run Selector	Denitsa Eckweiler	Nov 06, 2014
GSE43013	Gene Expression Defines Natural Changes in Mammalian Lifespan	Expression profiling by high throughput sequencing	Ursus americanus Tamias sibiricus Tadarida brasiliensis Sus scrofa Suncus murinus Rattus norvegicus Petaurus breviceps Peromyscus leucopus Oryctolagus cuniculus Mus musculus Murina leucogaster Mesocricetus auratus Meriones unguiculatus Meles meles Felis catus Erinaceus europaeus Equus caballus Chlorocebus aethiops Cavia porcellus Capra hircus Canis lupus familiaris Bos taurus Acomys cahirinus	141	GTF TXT SRA Run Selector	Alexey Fushan	Feb 17, 2015
GSE19427	miRNA profiling by Agilent mouse miRNA microarray	Non-coding RNA profiling by array	Urocitellus parryii Mus musculus	3	TXT	Wenchao Hu	Nov 30, 2010
GSE19808	miRNA profiling of miRNAs in Hibernating Arctic Ground Squirrels	Non-coding RNA profiling by array Non-coding RNA profiling by high throughput sequencing	Urocitellus parryii Mus musculus	6	TXT	Wenchao Hu	Nov 30, 2010
GSE77213	High-throughput functional comparison of promoter and enhancer activities	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	unidentified plasmid Mus musculus	60	TXT XLS XLSX SRA Run Selector	Thomas Andy Nguyen	May 23, 2016
GSE150858	Barcoded viral tracing of single-cell interactions in CNS inflammation	Other Expression profiling by high throughput sequencing	unidentified plasmid Suid alphaherpesvirus 1 Mus musculus	128	CSV TAR TSV TXT ZIP	Michael Wheeler	Apr 22, 2021
GSE180714	Rewiring of human neurodevelopmental gene regulatory programs by Human Accelerated Regions (HARs)	Other	unidentified plasmid Mus musculus Homo sapiens	14	BED TXT SRA Run Selector	Janet Song	Jul 24, 2021
GSE99872	Therapeutic antibodies to ganglioside GD2 evolved from highly selective germline antibodies I	Protein profiling by protein array	unidentified Trypanosoma cruzi Sus scrofa domesticus Senegalia senegal Rhodotorula Quercus alba Pandalus borealis Pachymenia carnosa Ovis aries Oryctolagus cuniculus Oncorhynchus nerka Mus musculus Megathura crenulata Human immunodeficiency virus 1 Homo sapiens Gossypium hirsutum Gallus gallus Frangula alnus Dermestes lardarius Ceratonia siliqua Bothrops moojeni Bos taurus	6	GPR TXT	Jeff Gildersleeve	Aug 25, 2017