GEO Browser - GEO

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365 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Rattus norvegicus		CSV
GSE223748	Mammalian Methylation Consortium	Methylation profiling by array	Acinonyx jubatus Acomys cahirinus Addax nasomaculatus Aepyceros melampus Alexandromys fortis Alexandromys maximowiczii Alexandromys mongolicus Alexandromys oeconomus Alticola barakshin Alticola semicanus Amblysomus hottentotus Antidorcas marsupialis Antrozous pallidus Aonyx cinereus Aplodontia rufa Apodemus agrarius Apodemus peninsulae Apodemus sylvaticus Apodemus uralensis Artibeus jamaicensis Arvicanthis niloticus Asellia tridens Atelerix albiventris Balaena mysticetus Balaenoptera borealis Balaenoptera musculus Bathyergus janetta Bathyergus suillus Blarina brevicauda Bos taurus Bradypus variegatus Cabassous unicinctus Caenolestes fuliginosus Callithrix geoffroyi Callithrix jacchus Callospermophilus lateralis Callospermophilus saturatus Canis latrans Canis lupus familiaris Capra hircus Capreolus capreolus Carollia perspicillata Castor canadensis Cavia aperea Cavia porcellus Cavia tschudii Cephalorhynchus commersonii Cephalorhynchus hectori hectori Cephalorhynchus hectori maui Ceratotherium simum simum Cervus canadensis Cervus elaphus Chaetophractus villosus Cheirogaleus medius Chinchilla lanigera Chlorocebus sabaeus Choloepus didactylus Choloepus hoffmanni Chrysocyon brachyurus Clethrionomys gapperi Condylura cristata Connochaetes taurinus albojubatus Cricetomys gambianus Cricetulus barabensis Cricetulus griseus Cricetulus longicaudatus Crocidura cyanea Crocuta crocuta Cryptomys hottentotus Ctenomys lewisi Ctenomys opimus Ctenomys steinbachi Cuniculus paca Cyclopes didactylus Cynopterus brachyotis Dasypus novemcinctus Daubentonia madagascariensis Delphinapterus leucas Delphinus delphis Dendrohyrax arboreus Desmodus rotundus Diceros bicornis Didelphis marsupialis Didelphis virginiana Dipus sagitta Dromiciops gliroides Echinops telfairi Eidolon helvum Elephantulus edwardii Elephantulus myurus Elephas maximus Ellobius talpinus Enhydra lutris Eozapus setchuanus Eptesicus fuscus Equus asinus somalicus Equus caballus Equus grevyi Equus quagga Erethizon dorsatum Erinaceus europaeus Eudorcas thomsonii Eulemur albifrons Eulemur coronatus Eulemur flavifrons Eulemur fulvus Eulemur fulvus collaris Eulemur macaco Eulemur mongoz Eulemur rubriventer Eulemur rufus Eulemur sanfordi Eumetopias jubatus Felis catus Fukomys damarensis Galago moholi Galea musteloides Galea musteloides leucoblephara Galeopterus variegatus Gazella leptoceros Georychus capensis Gerbillus cheesmani Gerbillus nanus Giraffa camelopardalis Glaucomys sabrinus Globicephala macrorhynchus Gorilla gorilla Hapalemur griseus Hemicentetes semispinosus Hemiechinus auritus Heterocephalus glaber Hipposideros ruber Hippotragus equinus Hippotragus niger Homo sapiens Hydrochoerus hydrochaeris Hylomys suillus Hystrix cristata Ictidomys tridecemlineatus Jaculus jaculus Kobus megaceros Lagenorhynchus albirostris Lagenorhynchus obliquidens Lasiopodomys brandtii Lasiopodomys gregalis Lasiopodomys mandarinus Lemur catta Leptonycteris yerbabuenae Lepus americanus Lepus californicus Litocranius walleri Loris tardigradus Loxodonta africana Lycaon pictus Lynx rufus Macaca mulatta Macropus fuliginosus Macropus giganteus Macroscelides proboscideus Marmota flaviventris Marmota monax Martes americana Megaptera novaeangliae Meriones libycus Meriones rex Meriones unguiculatus Mesocricetus auratus Mesoplodon bidens Micaelamys namaquensis Microcebus murinus Microgale cowani Microgale drouhardi Microgale thomasi Microtus guentheri Microtus ochrogaster Microtus pennsylvanicus Microtus richardsoni Mirza zaza Molossus molossus Monodelphis domestica Mops pumilus Muntiacus vaginalis Mus minutoides Mus musculus Mustela altaica Mustela frenata Mustela putorius furo Myocastor coypus Myodes rufocanus Myotis brandtii Myotis evotis Myotis lucifugus Myotis myotis Myotis nattereri Myotis thysanodes Myotis vivesi Myotis yumanensis Nanger dama Nanger granti Nanger soemmerringii Nannospalax ehrenbergi Nannospalax galili Napaeozapus insignis Neogale vison Neomys fodiens Neophoca cinerea Neotoma cinerea Nesogale talazaci Neurotrichus gibbsii Notamacropus agilis Notamacropus eugenii Notamacropus rufogriseus Nothocricetulus migratorius Nyctalus noctula Nycticebus coucang Nycticeius humeralis Ochotona alpina Ochotona dauurica Ochotona hyperborea Ochotona pallasi Ochotona princeps Ochotona rufescens Odobenus rosmarus divergens Odocoileus virginianus Okapia johnstoni Ondatra zibethicus Orcinus orca Oreamnos americanus Orientallactaga sibirica Ornithorhynchus anatinus Orycteropus afer Oryctolagus cuniculus Osphranter robustus Osphranter rufus Otolemur crassicaudatus Ovis aries Pan troglodytes Panthera leo Panthera tigris Papio hamadryas Paraechinus aethiopicus Paraechinus hypomelas Parascalops breweri Perodicticus potto Peromyscus californicus Peromyscus eremicus Peromyscus leucopus Peromyscus maniculatus Peromyscus polionotus Phascolarctos cinereus Phoca groenlandica Phoca vitulina Phocoena phocoena Phodopus campbelli Phodopus roborovskii Phyllostomus discolor Phyllostomus hastatus Physeter catodon Pipistrellus pipistrellus Plecotus auritus Pongo pygmaeus Procavia capensis Propithecus coquereli Propithecus diadema Propithecus tattersalli Pteropus giganteus Pteropus hypomelanus Pteropus poliocephalus Pteropus pumilus Pteropus rodricensis Pteropus vampyrus Puma concolor Rattus norvegicus Rattus rattus Rhabdomys pumilio Rhinoceros unicornis Rhinolophus alcyone Rhinolophus ferrumequinum Rhinopoma hardwickii Rhombomys opimus Rhynchonycteris naso Rousettus aegyptiacus Saccopteryx bilineata Sarcophilus harrisii Scalopus aquaticus Scapanus orarius Sciurus carolinensis Sciurus niger Setifer setosus Smutsia temminckii Sorex caecutiens Sorex cinereus Sorex hoyi Sorex isodon Sorex minutissimus Sorex palustris Sorex roboratus Sorex trowbridgii Sorex tundrensis Sorex vagrans Steno bredanensis Suncus murinus Suncus varilla Suricata suricatta Sus scrofa Sus scrofa domesticus Sylvilagus audubonii Sylvilagus bachmani Sylvilagus brasiliensis Sylvilagus floridanus Sylvilagus nuttallii Tachyglossus aculeatus Tadarida brasiliensis Talpa occidentalis Tamandua mexicana Tamandua tetradactyla Tamias amoenus Tamias striatus Tamias townsendii Tamiasciurus douglasii Tamiasciurus hudsonicus Tenrec ecaudatus Tolypeutes matacus Trachypithecus francoisi Tragelaphus angasii Tragelaphus eurycerus Tragelaphus imberbis Tragelaphus oryx Tragelaphus spekii Tragelaphus strepsiceros Trichechus manatus Tupaia belangeri Tupaia gracilis Tupaia longipes Tupaia tana Tursiops aduncus Tursiops truncatus Urocitellus columbianus Ursus americanus Varecia rubra Varecia variegata Vicugna pacos Vombatus ursinus Vulpes vulpes Xanthonycticebus pygmaeus Zalophus californianus Zapus princeps	15043	CSV DOCX IDAT	Steve Horvath	Aug 05, 2023
GSE225288	N57.Dataset	Methylation profiling by array	Balaena mysticetus Homo sapiens Mus musculus Rattus norvegicus	105	CSV IDAT	Steve Horvath	Aug 05, 2023
GSE21799	Control of oligodendroglial cell number by the miR-17~92 family of miRNA cluster (miRNA Exiqon Part)	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Mus musculus Rattus norvegicus human gammaherpesvirus 4	2	CSV	Gabriela Salinas	Jun 01, 2010
GSE21801	Control of oligodendroglial cell number by the miR-17~92 family of miRNA cluster	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Mus musculus Rattus norvegicus human gammaherpesvirus 4	12	CSV TXT	Gabriela Salinas	Jun 01, 2010
GSE42181	Affect of liver transcriptome by acute acetaminophen exposure [miRNA]	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	10	CSV	Ji-Hoon Cho	May 03, 2013
GSE42182	Affect of liver transcriptome by acute acetaminophen exposure	Expression profiling by array Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	20	CSV TXT	Ji-Hoon Cho	May 03, 2013
GSE52869	miRNA expression signatures in heart tissues of mice simulating posttraumatic stress disorder (PTSD) [Study1]	Non-coding RNA profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid gammaherpesvirus 4 Mus musculus Mus musculus cytomegalovirus 2 Rattus norvegicus human gammaherpesvirus 4	32	CSV	Ji-Hoon Cho	Dec 04, 2013
GSE126424	Cross-species association of microRNA expression in mammary epithelial cells with stem/progenitor characteristics and cancer susceptibility	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Bos taurus Canis lupus familiaris Equus caballus Homo sapiens Rattus norvegicus Sus scrofa	24	CSV SRA Run Selector	Praveen Sethupathy	Feb 04, 2023
GSE133904	The Right Ventricular Fibroblast Secretome Drives Cardiomyocyte Dedifferentiation	Expression profiling by high throughput sequencing	Bos taurus Rattus norvegicus	12	CSV SRA Run Selector	Philip D Tatman	Jul 07, 2019
GSE190663	Methylation studies in common marmoset	Methylation profiling by array	Callithrix jacchus Homo sapiens Mus musculus Rattus norvegicus	96	CSV DOCX IDAT	Steve Horvath	Aug 05, 2023
GSE184216	Methylation studies in roe deer	Methylation profiling by array	Capreolus capreolus Homo sapiens Mus musculus Rattus norvegicus	94	CSV DOCX IDAT	Steve Horvath	Aug 02, 2022
GSE190662	Methylation studies in strepsirrhini primates	Methylation profiling by array	Cheirogaleus medius Daubentonia madagascariensis Eulemur albifrons Eulemur coronatus Eulemur flavifrons Eulemur fulvus Eulemur fulvus collaris Eulemur macaco Eulemur mongoz Eulemur rubriventer Eulemur rufus Eulemur sanfordi Galago moholi Hapalemur griseus Homo sapiens Lemur catta Loris tardigradus Microcebus murinus Mirza zaza Mus musculus Nycticebus coucang Otolemur crassicaudatus Perodicticus potto Propithecus coquereli Propithecus diadema Propithecus tattersalli Rattus norvegicus Varecia rubra Xanthonycticebus pygmaeus	91	CSV DOCX IDAT	Steve Horvath	Aug 05, 2023
GSE190660	Methylation studies in the vervet monkey	Methylation profiling by array	Chlorocebus sabaeus Homo sapiens Mus musculus Rattus norvegicus	240	CSV DOCX IDAT	Steve Horvath	Aug 05, 2023
GSE184410	Mouse DNA methylation atlas using Infinium Mouse Methylation Beadchips	Methylation profiling by genome tiling array	Cricetulus griseus Homo sapiens Mus musculus Rattus norvegicus	1239	CSV IDAT	Wanding Zhou	Apr 11, 2022
GSE184222	Methylation studies in wild ass and Grevy's zebra	Methylation profiling by array	Equus asinus somalicus Equus grevyi Homo sapiens Mus musculus Rattus norvegicus	12	CSV DOCX IDAT	Steve Horvath	Nov 25, 2021
GSE184223	Methylation studies in plains zebras	Methylation profiling by array	Equus quagga burchellii Homo sapiens Mus musculus Rattus norvegicus	118	CSV DOCX IDAT	Steve Horvath	Nov 25, 2021
GSE227319	N27.Pinniped Dataset	Methylation profiling by array	Eumetopias jubatus Homo sapiens Mus musculus Neophoca cinerea Odobenus rosmarus divergens Phoca groenlandica Phoca vitulina Rattus norvegicus Zalophus californianus	171	CSV IDAT	Steve Horvath	Aug 05, 2023
GSE5350	MicroArray Quality Control (MAQC) Project	Expression profiling by array Expression profiling by RT-PCR	Homo sapiens Rattus norvegicus	943	CEL CSV GPR LSR PDF TXT ZIP	Leming Shi	Sep 08, 2006
GSE29707	Analysis of deregulated microRNAs in malignant mesothelioma	Non-coding RNA profiling by array	Homo sapiens Mus musculus Rattus norvegicus	40	CSV	Daniel Gilbert Weber	Jan 11, 2012
GSE45179	Intrahepatic miRNA/mRNA expression in non-responders to pegylated interferon plus ribavirin combination therapy for chronic hepatitis C (miRNA microarray data)	Non-coding RNA profiling by array	Homo sapiens Mus musculus Rattus norvegicus	12	CSV	Kaoru Mogushi	May 15, 2014