GEO Browser - GEO

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2846 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Rattus norvegicus		TXT
GSE28782	Chromatin occupancy of TCF7L2 in hepatocytes	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BAM TXT SRA Run Selector	Luke Norton	Sep 12, 2011
GSE26938	Global analysis of in vivo Pax8-binding sites in rat thyroid cells using high-throughput technologies: Chip-Seq and whole genome expression arrays	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Rattus norvegicus	18	BED TXT WIG	Pilar Santisteban	Jun 28, 2012
GSE38056	Novel long non-coding RNAs are involved in cellular response to angiotensin II signaling	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Rattus norvegicus	8	BED TXT SRA Run Selector	Amy Leung	Jun 30, 2013
GSE38571	Integrated transcriptomic and epigenomic analysis of primary human lung cell differentiation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	38	BED TXT	Crystal N Marconett	Apr 15, 2013
GSE42207	Rodent trophoblast epigenome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	26	BED TXT SRA Run Selector	Edward Chuong	Dec 04, 2012
GSE48321	High-Resolution Profiling of Novel Transcribed Regions During Rat Spermatogenesis	Expression profiling by high throughput sequencing	Rattus norvegicus	8	BED GTF TXT SRA Run Selector	Frédéric Chalmel	Jun 01, 2014
GSE61207	Global MEF2 target gene analysis in cardiac and skeletal muscle reveals novel regulation of DUSP6 by p38MAPKMEF2 signaling	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	8	BED TXT	John C McDermott	Sep 09, 2014
GSE61991	Neural circular RNAs are derived from synaptic genes and regulated by development and plasticity	Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	35	BED FA TXT SRA Run Selector	Xintian Arthur YOU	Feb 25, 2015
GSE72727	Chromatin Remodeler CHD7 mutated in CHARGE Syndrome Interacts with Sox10 to Regulate Timing of CNS Myelination and Remyelination.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	6	BED TXT	Richard Lu	Feb 29, 2016
GSE76412	Hdac3 Interaction with p300 Histone Acetyltransferase Regulates the Oligodendrocyte and Astrocyte Lineage Fate Switch	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	6	BED TXT	Richard Lu	Feb 21, 2016
GSE82211	The lncRNA genomic landscape of oligodendrocytes reveals myelination control by a lncOL1/Suz12 complex in the CNS	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	11	BED FPKM_TRACKING TXT	Richard Lu	Dec 28, 2016
GSE87769	Identification of Tfcp2l1 target genes in the mouse kidney	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	14	BED CEL TXT	Max Werth	Jun 19, 2017
GSE90720	Fox Family Protein Jumu Reads 6mA-DNA Codes and Contributes to Zygotic Gene Activation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Drosophila melanogaster Macaca mulatta Mus musculus Rattus norvegicus	22	BED TXT SRA Run Selector	Shunmin He	Jan 14, 2023
GSE100505	Transcriptional Profiling Reveals Extraordinary Diversity Among Skeletal Muscle Tissues	Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	126	BED TXT SRA Run Selector	Michael Hughes	May 18, 2018
GSE119814	Seh1 Interacts with Olig2 and Brd7 to Promote Oligodendrocyte Differentiation and Myelination (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	3	BED TXT SRA Run Selector	Liu Zhixiong	Sep 12, 2018
GSE119816	Seh1 Interacts with Olig2 and Brd7 to Promote Oligodendrocyte Differentiation and Myelination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	8	BED TXT	Liu Zhixiong	Sep 12, 2018
GSE122838	Tet1-mediated Epigenetic Programming Regulates Calcium Homeostasis and Stage-specific CNS Myelination and Regeneration	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	13	BED TXT SRA Run Selector	Richard Lu	Nov 20, 2019
GSE123328	Open chromatin landscape of rat microglia upon inflammatory or pro-invasive polarization	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	6	BED CSV TXT SRA Run Selector	Michał Dąbrowski	Jul 25, 2019
GSE126088	α1ACT is essential for survival and early cerebellar programming in a critical neonatal window [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	6	BED TXT SRA Run Selector	Yan Li	Feb 06, 2019
GSE126089	α1ACT is essential for survival and early cerebellar programming in a critical neonatal window	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	30	BED TXT	Yan Li	Feb 06, 2019