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25 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Naumovozyma castellii
GSE163866	The evolution, evolvability, and engineering of gene regulatory DNA [RNA-seq]	Expression profiling by high throughput sequencing	Candida albicans Kluyveromyces lactis Lachancea waltii Nakaseomyces glabratus Naumovozyma castellii Saccharomyces bayanus Saccharomyces cerevisiae Schizosaccharomyces japonicus Schizosaccharomyces octosporus Schizosaccharomyces pombe Yarrowia lipolytica	11	TXT SRA Run Selector	Carl G de Boer	Dec 23, 2021
GSE119211	SFP1 (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Kluyveromyces lactis Naumovozyma castellii Saccharomyces cerevisiae Saccharomyces paradoxus	70	BW SRA Run Selector	Carl G de Boer	Aug 29, 2020
GSE119237	SFP1 (RNA-seq)	Expression profiling by high throughput sequencing	Kluyveromyces lactis Nakaseomyces glabratus Naumovozyma castellii Saccharomyces cerevisiae Saccharomyces paradoxus Schizosaccharomyces pombe	58	TXT SRA Run Selector	Carl G de Boer	Aug 29, 2020
GSE119238	The roles of duplication and divergence in the evolution of a transcription factor	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Kluyveromyces lactis Nakaseomyces glabratus Naumovozyma castellii Saccharomyces cerevisiae Saccharomyces paradoxus Schizosaccharomyces pombe	128	BW	Carl G de Boer	Aug 29, 2020
GSE119645	A comparative gene expression data set for functional Sfp1 knockdown mutants and wild type strains for five yeast Species in the LOG growth phase	Expression profiling by array	Kluyveromyces lactis Nakaseomyces glabratus Naumovozyma castellii Saccharomyces cerevisiae Schizosaccharomyces pombe	184	XLSX	Carl G de Boer	Aug 26, 2020
GSE143548	Xrn1p Acts at Multiple Steps in the Budding-Yeast RNAi Pathway to Enhance the Efficiency of Silencing	Expression profiling by high throughput sequencing Other	Naumovozyma castellii	9	FASTA GTF TXT SRA Run Selector	David P. Bartel	May 20, 2020
GSE90041	Total RNA-Seq in wild-type (WT), dcr1, xrn1 and xrn1 dcr1 strains of N. castellii	Non-coding RNA profiling by high throughput sequencing	Naumovozyma castellii	8	XLSX SRA Run Selector	Maxime Wery	Aug 21, 2019
GSE129232	Dicer-dependent small RNAs production from antisense long non-coding RNAs in N. castellii	Non-coding RNA profiling by high throughput sequencing	Naumovozyma castellii	8	XLSX SRA Run Selector	Maxime Wery	Aug 21, 2019
GSE129233	Endogenous RNAi pathway evolutionarily shapes the destiny of the antisense lncRNA transcriptome	Non-coding RNA profiling by high throughput sequencing	Naumovozyma castellii	17		Maxime Wery	Aug 21, 2019
GSE129269	Dcr1-GFP is functional for 22-23 nt small RNAs production	Non-coding RNA profiling by high throughput sequencing	Naumovozyma castellii	1	XLSX SRA Run Selector	Maxime Wery	Aug 21, 2019
GSE75235	Evolutionary rewiring of the ROX genes controlling hypoxic response in yeasts	Expression profiling by high throughput sequencing	Naumovozyma castellii	24	TXT SRA Run Selector	Markus S Schröder	Jul 31, 2018
GSE94625	A phylogenetic framework to study the evolution of transcriptional regulatory networks [Agilent microarray]	Expression profiling by array	Candida albicans Kluyveromyces lactis Nakaseomyces glabratus Naumovozyma castellii Saccharomyces cerevisiae Schizosaccharomyces pombe	103	TXT	Sushmita Roy	Jul 01, 2017
GSE94628	A phylogenetic framework to study the evolution of transcriptional regulatory networks	Expression profiling by high throughput sequencing Expression profiling by array	Candida albicans Kluyveromyces lactis Nakaseomyces glabratus Naumovozyma castellii Saccharomyces cerevisiae Schizosaccharomyces pombe	135	TXT	Sushmita Roy	Jul 01, 2017
GSE89337	Regulation of DNA replication time is crucial for appropriate gene expression	Other	Henningerozyma blattae Kluyveromyces lactis Lachancea kluyveri Nakaseomyces glabratus Naumovozyma castellii Saccharomyces cerevisiae Zygosaccharomyces rouxii	14	FASTA WIG SRA Run Selector	Conrad A Nieduszynski	Jun 28, 2017
GSE58884	Intron evolution in Saccharomycetaceae	Expression profiling by high throughput sequencing	Naumovozyma castellii Saccharomyces cerevisiae Saccharomyces kudriavzevii Saccharomyces uvarum	4	BED TXT SRA Run Selector	Katarzyna B Hooks	Sep 15, 2014
GSE36253	Evolutionary principles of modular gene regulation in Yeasts	Expression profiling by array	Candida albicans Debaryomyces hansenii Kluyveromyces lactis Lachancea kluyveri Lachancea kluyveri NRRL Y-12651 Lachancea waltii Nakaseomyces glabratus Naumovozyma castellii Saccharomyces bayanus Saccharomyces cerevisiae Saccharomyces mikatae Saccharomyces paradoxus Schizosaccharomyces japonicus Schizosaccharomyces pombe Vanderwaltozyma polyspora Yarrowia lipolytica	422	TXT	Dawn Thompson	Jun 20, 2013
GSE38478	Evolutionary principles of modular gene regulation in Yeasts	Expression profiling by array	Candida albicans Kluyveromyces lactis Lachancea waltii Nakaseomyces glabratus Naumovozyma castellii Saccharomyces cerevisiae Schizosaccharomyces japonicus Schizosaccharomyces pombe	205	TXT	Ilan Wapinski	Apr 25, 2013
GSE37723	Degradome sequencing from S. castellii	Expression profiling by high throughput sequencing	Naumovozyma castellii	2	TXT SRA Run Selector	David Eric Weinberg	May 14, 2012
GSE37725	Structure of yeast Argonaute with guide RNA	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Naumovozyma castellii Vanderwaltozyma polyspora	4	TXT	David Eric Weinberg	May 14, 2012
GSE21960	The role of nucleosome positioning in the evolution of gene regulation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Candida albicans Debaryomyces hansenii Kluyveromyces lactis Lachancea kluyveri NRRL Y-12651 Lachancea waltii Nakaseomyces glabratus Naumovozyma castellii Saccharomyces bayanus Saccharomyces cerevisiae Saccharomyces mikatae Saccharomyces paradoxus Yarrowia lipolytica	61	TXT WIG	Alex M Tsankov	Jul 06, 2010