245 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE13622
The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome
8 Desiree Tillo Dec 18, 2008
GSE16090
In vivo RNAi screening identifies regulators of actin dynamics as key determinants of lymphoma progression
8
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Corbin Elizabeth Meacham Sep 23, 2009
GSE20555
RNA-Seq on libraries made from serial dilutions of Drosophila melanogaster S2 cell mRNA and ERCC external RNA controls
7 Brian Oliver Apr 19, 2010
GSE20579
RNA-Seq on libraries made from ERCC external RNA controls, and a mixture of D. melanogaster S2 cell mRNA and ERCC mRNAs
4 Brian Oliver Apr 19, 2010
GSE26767
A modified bacterial one-hybrid system yields improved quantitative models of transcription factor specificity
  • Link icon synthetic construct
53
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Scot Wolfe Apr 28, 2011
GSE35806
Exploring the DNA-Recognition Potential of Homeodomains
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249 Scot Wolfe Feb 15, 2012
GSE36540
Sequencing random oligonucleotides using standard GA II protocol
  • Link icon synthetic construct
10 Helio Pais Jul 23, 2012
GSE42709
Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants.
  • Link icon synthetic construct
125
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Scot Wolfe Dec 06, 2012
GSE51156
Overlapping and distinct functions of CstF64 and CstF64τ in mammalian mRNA 3’ processing
5 Yongsheng Shi Sep 30, 2013
GSE48033
The ABRF Next-Generation Sequencing Study (ABRF-NGS): Multi-platform and cross-methodological reproducibility of transcriptome profiling by RNA-seq [Ion Torrent PGM]
21 Christopher E Mason May 14, 2014
GSE55346
Probing the effect of promoters on noise in gene expression using thousands of designed sequences
  • Link icon synthetic construct
2 Eilon Sharon Jul 12, 2014
GSE58652
Tn5 transposase and tagmentation procedures for massively scaled sequencing projects
67 Rickard Sandberg Jul 14, 2014
GSE47774
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequence Quality Control consortium
3396 Leming Shi Aug 08, 2014
GSE51170
Identification of building principles of methylation states at CG rich regions by high-throughput editing of a mammalian genome
19 Dirk Schuebeler Sep 30, 2014
GSE58426
Cas9 target DNA specificity
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118 Andrew Fire Nov 14, 2014
GSE62183
shRNA Sensor Analysis of DSIR Selected shRNAs
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96 Simon Robert Vincent Knott Nov 24, 2014
GSE62185
Sub-genomewide shRNAs constructed using an optimized selection algorithm and microRNA backbone provide stronger evidence for follow-up studies
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24 Simon Robert Vincent Knott Nov 24, 2014
GSE62186
shRNA Sensor Analysis of 5' U converted shRNAs reveals 3' target bias exists in addition to 5' guide bias
  • Link icon synthetic construct
11 Simon Robert Vincent Knott Nov 24, 2014
GSE63606
An optimized kit-free method for making strand-specific deep sequencing libraries from RNA fragments
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11 Job Dekker Nov 26, 2014
GSE52521
Highly parallel identification of sequence preferences for eukaryotic C2H2 zinc finger domains using a bacterial 1-hybrid assay
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403 Hamed S Najafabadi Feb 17, 2015