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11 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Amphimedon queenslandica
GSE12578	The Early Origins and Evolution of microRNAs and piRNAs in Animals	Non-coding RNA profiling by high throughput sequencing	Amphimedon queenslandica Monosiga brevicollis Nematostella vectensis Trichoplax adhaerens	17		TXT SRA Run Selector	andrew grimson	Oct 01, 2008
GSE29978	Transcriptome of the demosponge Amphimedon queenslandica at life cycle transitions	Expression profiling by high throughput sequencing	Amphimedon queenslandica	11		WIG SRA Run Selector	Cecilia Conaco	Jul 10, 2012
GSE54364	A high-resolution Amphimedon queenslandica transriptomic timecourse	Expression profiling by high throughput sequencing	Amphimedon queenslandica	59		CSV GTF SRA Run Selector	Itai Yanai	Jan 24, 2014
GSE60483	Amphimedon queenslandica high resolution developmental transcriptomic time-course	Expression profiling by high throughput sequencing	Amphimedon queenslandica	124		FASTA TAB SRA Run Selector	Itai Yanai	Feb 18, 2016
GSE70185	The mid-developmental transition and the evolution of animal body plans	Expression profiling by high throughput sequencing	Amphimedon queenslandica Caenorhabditis elegans Danio rerio Drosophila melanogaster Hypsibius dujardini Mnemiopsis leidyi Nematostella vectensis Platynereis dumerilii Schmidtea polychroa Strongylocentrotus purpuratus	1143		PDF XLSX	Itai Yanai	Feb 18, 2016
GSE79645	Landscape of histone modifications in a sponge reveals the origin of animal cis-regulatory complexity	Genome binding/occupancy profiling by high throughput sequencing	Amphimedon queenslandica	20		BED BW SRA Run Selector	Federico Gaiti	Mar 31, 2017
GSE111068	Early metazoan cell type diversity and the evolution of multicellular gene regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Amphimedon queenslandica Mnemiopsis leidyi Trichoplax adhaerens	10		BW TXT SRA Run Selector	Arnau Sebe-Pedros	Jul 05, 2018
GSE124016	Convergent evolution of a vertebrate-like methylome in a marine sponge	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Amphimedon queenslandica Mnemiopsis leidyi Nematostella vectensis Sycon ciliatum	36		CGMAP TXT SRA Run Selector	Alex de Mendoza	Aug 02, 2019
GSE130274	Interdependent photo- and chemosensory systems regulate larval settlement in a marine sponge	Expression profiling by high throughput sequencing	Amphimedon queenslandica	43		TXT SRA Run Selector	Tahsha Say	Oct 09, 2019
GSE134077	Transcriptomes of individual Amphimedon queenslandica larvae and settled post-larvae that were presented with one of three different settlement cues at different times (hours) post emergence from the adult sponge	Expression profiling by high throughput sequencing	Amphimedon queenslandica	144		TXT SRA Run Selector	Tahsha Say	Jun 11, 2024
GSE205425	Ribosomal RNA-depletion provides an efficient method for successful dual RNA-Seq expression profiling of a marine sponge holobiont	Expression profiling by high throughput sequencing	Amphimedon queenslandica	6		MATRIX	Xue Yan Xiang	Jun 06, 2022