GEO Browser - GEO

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39 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Nematostella vectensis
GSE157085	Diverse CGG binding proteins across eukaryotes produced by independent domestications of hAT transposons	Other	Acanthochromis polyacanthus Acipenser ruthenus Acyrthosiphon pisum Aedes aegypti Amphiprion ocellaris Amphiprion percula Anabarilius grahami Anabas testudineus Austrofundulus limnaeus Chrysemys picta Crocodylus porosus Culex quinquefasciatus Cyprinus carpio Erpetoichthys calabaricus Fundulus heteroclitus Gallus gallus Hippocampus comes Hofstenia miamia Homo sapiens Hucho hucho Kryptolebias marmoratus Labeo rohita Latimeria chalumnae Locusta migratoria Mola mola Nematostella vectensis Paramormyrops kingsleyae Petromyzon marinus Rhipicephalus appendiculatus Rhizophagus irregularis Rhodnius prolixus Salarias fasciatus Salmo salar Sparus aurata Sphaeramia orbicularis synthetic construct	258	TXT	Isaac Yellan	Feb 09, 2021
GSE242174	Reconstructing the gene regulatory network that shaped the evolution of larval sensory structure with a long ciliary tuft in Cnidaria.	Expression profiling by high throughput sequencing	Acropora millepora Acropora tenuis Aurelia aurita Nematostella vectensis	18	FASTA TXT	vengamanaidu modepalli	Jan 17, 2024
GSE12578	The Early Origins and Evolution of microRNAs and piRNAs in Animals	Non-coding RNA profiling by high throughput sequencing	Amphimedon queenslandica Monosiga brevicollis Nematostella vectensis Trichoplax adhaerens	17	TXT SRA Run Selector	andrew grimson	Oct 01, 2008
GSE70185	The mid-developmental transition and the evolution of animal body plans	Expression profiling by high throughput sequencing	Amphimedon queenslandica Caenorhabditis elegans Danio rerio Drosophila melanogaster Hypsibius dujardini Mnemiopsis leidyi Nematostella vectensis Platynereis dumerilii Schmidtea polychroa Strongylocentrotus purpuratus	1143	PDF XLSX	Itai Yanai	Feb 18, 2016
GSE124016	Convergent evolution of a vertebrate-like methylome in a marine sponge	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Amphimedon queenslandica Mnemiopsis leidyi Nematostella vectensis Sycon ciliatum	36	CGMAP TXT SRA Run Selector	Alex de Mendoza	Aug 02, 2019
GSE19824	Genome-wide evolutionary analysis of eukaryotic DNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera Bombyx mori Chlorella variabilis Ciona intestinalis Coprinopsis cinerea Drosophila melanogaster Laccaria bicolor Nematostella vectensis Oryza sativa Phycomyces blakesleeanus Physcomitrium patens Postia placenta Selaginella moellendorffii Tetraodon nigroviridis Tribolium castaneum Uncinocarpus reesii Volvox carteri	33	GFF TXT SRA Run Selector	Toshiro Nishimura	Apr 15, 2010
GSE73545	The evolution of DNA methylation inheritance and programming in animals	Methylation profiling by high throughput sequencing	Apis mellifera Ciona savignyi Nematostella vectensis Strongylocentrotus purpuratus	22	BED SRA Run Selector	jiang liu	Nov 17, 2019
GSE135498	Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA	Other	Capsaspora owczarzaki Homo sapiens Mus musculus Nematostella vectensis Neurospora crassa Oryza sativa	40	BIGWIG BW TXT SRA Run Selector	Christopher Benner	Sep 16, 2019
GSE223913	Pol II pausing is a milestone on the road to complex animals	Other	Capsaspora owczarzaki Creolimax fragrantissima Daphnia pulex Dictyostelium discoideum Dryas iulia Escherichia coli Haloferax mediterranei Mus musculus Nematostella vectensis Perkinsus marinus Sphaeroforma arctica Strongylocentrotus purpuratus	46		Alexandra Georgiana Chivu	Feb 05, 2024
GSE45588	Mechanisms of tentacle morphogenesis in the sea anemone, Nematostella vectensis	Expression profiling by array	Nematostella vectensis	6	TXT	Chris W Seidel	May 01, 2013
GSE46488	Evolutionary conservation of the eumetazoan gene regulatory landscape	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Nematostella vectensis	29	BED SRA Run Selector	Michaela Schwaiger	Dec 02, 2013
GSE58769	Early and late response of Nematostella vectensis transcriptome to heavy metals	Expression profiling by high throughput sequencing	Nematostella vectensis	16	TXT SRA Run Selector	Tamar Lotan	Dec 22, 2015
GSE71086	Nematostella vectensis high resolution developmental transcriptomic time-course	Expression profiling by high throughput sequencing	Nematostella vectensis	123	FASTA TXT SRA Run Selector	Itai Yanai	Feb 18, 2016
GSE94526	Post transcriptional modifications of miRNAs in the cnidarian Nematostella vectensis	Non-coding RNA profiling by high throughput sequencing	Nematostella vectensis	30	TXT SRA Run Selector	vengamanaidu modepalli	Aug 15, 2017
GSE95723	Cnidarian cell type diversity revealed by whole-organism single-cell RNA-seq analysis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Nematostella vectensis	8	BW TXT XLSX SRA Run Selector	Arnau Sebe-Pedros	May 31, 2018
GSE101604	Antagonistic BMP–cWNT signaling in the cnidarian Nematostella vectensis reveals insight into the evolution of mesoderm	Expression profiling by high throughput sequencing	Nematostella vectensis	9	TXT SRA Run Selector	david k Simmons	Jul 19, 2017
GSE110148	The methyltransferase HEN1 is required in Nematostella vectensis for microRNA and piRNA stability as well as larval metamorphosis	Non-coding RNA profiling by high throughput sequencing	Nematostella vectensis	8	TXT SRA Run Selector	vengamanaidu modepalli	Jan 01, 2019
GSE115184	The methyltransferase HEN1 is required for microRNA and piRNA stability as well as larval metamorphosis in Nematostella vectensis	Non-coding RNA profiling by high throughput sequencing	Nematostella vectensis	12	TXT SRA Run Selector	vengamanaidu modepalli	Jan 01, 2019
GSE132202	Transcriptional remodeling upon light removal in a model cnidarian: losses and gains in gene expression	Expression profiling by high throughput sequencing	Nematostella vectensis	136	TXT SRA Run Selector	Whitney at Leach	Jun 06, 2019
GSE132526	Decoupling behavioral and transcriptional responses to color in an eyeless cnidarian	Expression profiling by high throughput sequencing	Nematostella vectensis	96	TXT SRA Run Selector	Whitney at Leach	Jun 12, 2019