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69 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Acinetobacter baumannii
GSE31206	Colistin-resistant, lipopolysaccharide-deficient Acinetobacter baumannii responds to lipopolysaccharide loss through increased expression of genes involved in the synthesis and transport of lipoproteins, phospholipids and poly-beta-1,6-N-acetylglucosamine	Expression profiling by high throughput sequencing	Acinetobacter baumannii	4	BAI BAM TXT SRA Run Selector	Paul Francis Harrison	Aug 11, 2011
GSE40771	Expression Data from Acinetobacter baumannii strain ATCC 17978 and isogenic lpsB mutant cells	Expression profiling by array	Acinetobacter baumannii	8	CEL CHP	Paul Dunman	Dec 01, 2012
GSE52002	An Ribonuclease T2 Family Protein Modulates Acinetobacter baumannii Abiotic Surface Colonization	Expression profiling by array	Acinetobacter baumannii	4	CEL CHP	Paul Dunman	Jan 01, 2014
GSE107964	Transcriptomic analysis of paired patient isolates of Acinetobacter baumannii following failed colistin treatment	Expression profiling by high throughput sequencing	Acinetobacter baumannii	6	CSV GFF SRA Run Selector	David Richard Powell	Feb 19, 2018
GSE110207	Relationship between tolerance and persistence mechanisms in Acinetobacter baumannii strains with AbkAB Toxin-Antitoxin system	Expression profiling by high throughput sequencing	Acinetobacter baumannii	8	CSV FASTA TSV TXT XLS SRA Run Selector	Maria Tomas-Carmona	Feb 09, 2018
GSE111383	Characterizing Acinetobacter baumannii desiccation tolerance.	Expression profiling by high throughput sequencing	Acinetobacter baumannii	8	CSV	Xun Wang	Oct 27, 2018
GSE125017	Next Generation Sequencing of Wildtype and Thioredoxin-A knockout of a clinical isolate of Acinetobacter baumannii	Expression profiling by high throughput sequencing	Acinetobacter baumannii	6	CSV SRA Run Selector	Bernard Arulanandam	Jan 14, 2019
GSE125085	Method for absolute quantification of microbial communities by using both microarrays and competitive PCR	Other	Acinetobacter baumannii Aggregatibacter actinomycetemcomitans Bacillus cereus Bacteria Bifidobacterium adolescentis Campylobacter rectus Capnocytophaga gingivalis Cereibacter sphaeroides Clostridium beijerinckii Cutibacterium acnes Deinococcus radiodurans Enterococcus faecalis Escherichia coli Fusobacterium nucleatum Fusobacterium nucleatum subsp. nucleatum Helicobacter pylori Homo sapiens Lactobacillus gasseri Neisseria meningitidis Phocaeicola vulgatus Porphyromonas gingivalis Prevotella intermedia Prevotella nigrescens Pseudomonas aeruginosa Schaalia odontolytica Staphylococcus aureus Staphylococcus epidermidis Streptococcus agalactiae Streptococcus gordonii Streptococcus intermedius Streptococcus mutans Tannerella forsythia Treponema denticola	178	CSV	Naoyuki Togawa	Jan 16, 2019
GSE153967	Cerebrospinal fluid (CSF) boosts metabolism and virulence expression factors in Acinetobacter baumannii	Expression profiling by high throughput sequencing	Acinetobacter baumannii	4	CSV SRA Run Selector	M. S. Ramirez	Mar 03, 2021
GSE190119	Transcriptome analysis of A.baumannii 98-37-09 wild type compared to YhaK Tn mutant under antibiotic treatment in human serum.	Expression profiling by high throughput sequencing	Acinetobacter baumannii	4	CSV TXT SRA Run Selector	Mikaeel Imran Young	Aug 08, 2023
GSE217148	Genomic and Transcriptional Characterisation of Carbapenem and Colistin Resistance Mechanisms in Klebsiella pneumoniae	Expression profiling by high throughput sequencing Other	Acinetobacter baumannii Enterobacter asburiae Enterobacter bugandensis Enterobacter cloacae Enterobacter cloacae complex sp. R_G8 Klebsiella pneumoniae	22	CSV DIFF GFF PDF	John Osei Sekyere	Nov 07, 2022
GSE131949	Human pleural fluid elicits pyruvate and phenylalanine metabolism in Acinetobacter baumannii to enhance cytotoxicity and immune evasion	Expression profiling by high throughput sequencing	Acinetobacter baumannii	8	FASTA TSV TXT SRA Run Selector	M. S. Ramirez	May 31, 2019
GSE103244	The primary transcriptome of Acinetobacter baumannii ATCC 17978	Expression profiling by high throughput sequencing	Acinetobacter baumannii	5	GR SRA Run Selector	Carsten Kroeger	Jun 25, 2018
GSE100552	Transcriptomic analysis of A. baumannii during the course of a pneumonia infection	Expression profiling by high throughput sequencing	Acinetobacter baumannii	12	GTF TSV SRA Run Selector	Jose Luis Lavin	May 23, 2018
GSE194255	Transcriptomics analysis reveals the molecular mechanisms of the antibacterial activity of gallium nitrate against Acinetobacter baumannii isolated from bloodstream infections	Expression profiling by high throughput sequencing	Acinetobacter baumannii	6	RESULTS TXT	Changrui Qian	Jan 27, 2022
GSE85110	TSS-EMOTE, a refined protocol for a more complete and less biased global mapping of transcription start sites in bacterial pathogens.	Expression profiling by high throughput sequencing Other	Acinetobacter baumannii Klebsiella aerogenes Staphylococcus aureus Staphylococcus epidermidis	30	TSV SRA Run Selector	Julien Prados	Oct 15, 2016
GSE148264	Changes in relative transcript amounts caused by hydrogen sulfide treatment, deletion of BigR, and BigR mutant complement in Acinetobacter baumannii	Expression profiling by high throughput sequencing	Acinetobacter baumannii	12	TSV SRA Run Selector	David Peter Giedroc	Jun 15, 2020
GSE167117	Pleural fluid and Human Serum albumin modulate the behavior of a hypervirulent and Multidrug-resistant (MDR) Acinetobacter baumannii representative strain	Expression profiling by high throughput sequencing	Acinetobacter baumannii	12	TSV SRA Run Selector	M. S. Ramirez	Apr 28, 2021
GSE169081	DksA acts as a transcriptional switch in stress and virulence in Acinetobacter baumannii	Expression profiling by high throughput sequencing	Acinetobacter baumannii	24	TSV SRA Run Selector	Lars Barquist	Sep 13, 2022
GSE17221	Rapid Identification of Bacterial Pathogens using a PCR- and Microarray-Based Assay	Other	Acinetobacter baumannii Enterococcus faecalis Enterococcus faecium Haemophilus influenzae Homo sapiens Klebsiella pneumoniae Listeria monocytogenes Neisseria meningitidis Staphylococcus aureus Staphylococcus epidermidis Streptococcus agalactiae Streptococcus pneumoniae Streptococcus pyogenes unidentified	195	TXT	Anna-Kaarina Jarvinen	Aug 31, 2009