144 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterEscherichia coli str. K-12 substr. MG1655 Remove filterSRA Run Selector
GSE21906
Dissecting the in vivo metabolic potential of two human gut acetogens.
119 Jeremiah J Faith May 22, 2010
GSE26687
Predicting a human gut microbiota's response to diet in gnotobiotic mice.
490 Jeremiah J Faith May 20, 2011
GSE34449
Digital RNA Sequencing Minimizes Sequence-Dependent Bias and Amplification Noise with Optimized Single Molecule Barcodes
  • Link icon Escherichia coli str. K-12 substr. MG1655
2 Tony Z Jia Jan 07, 2012
GSE35641
The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria
7 Gene-Wei Li Apr 01, 2012
GSE40313
Genomic analysis of the combined effects of H-NS and co-regulators on E. coli gene expression
  • Link icon Escherichia coli str. K-12 substr. MG1655
16 Aswin Sai Narain Seshasayee Dec 01, 2012
GSE45443
RNA-seq analysis of Escherichia coli str. K-12 substr. MG1655
  • Link icon Escherichia coli str. K-12 substr. MG1655
54 Brian Tjaden Mar 26, 2013
GSE46118
UV-crosslinking and high throughput sequencing of cDNAs (CRAC) of the RNA chaperone Hfq in enterohaemorhaggic E. coli
11 Jai Justin Tree May 22, 2014
GSE46414
The response regulator ArcA uses a diverse binding site architechture to globally regulate carbon oxidation in E. coli [ChIP-Seq]
  • Link icon Escherichia coli str. K-12 substr. MG1655
2 Dan Park Oct 17, 2013
GSE46737
Genome-scale reconstruction of the sigma factor network in E. coli
  • Link icon Escherichia coli str. K-12 substr. MG1655
6 Donghyuk Kim Feb 05, 2014
GSE47509
High resolution view of bacteriophage lambda gene expression by ribosome profiling
  • Link icon Escherichia coli str. K-12 substr. MG1655
20 Huifeng Jiang Jul 01, 2013
GSE48409
The metabolic niche of a prominent sulfate-reducing human gut bacterium [1]
13 Federico E Rey Jun 29, 2013
GSE48807
The metabolic niche of a prominent sulfate-reducing human gut bacterium [2]
114 Federico E Rey Jul 12, 2013
GSE48829
Escherichia coli RNA-Seq
  • Link icon Escherichia coli str. K-12 substr. MG1655
9 Kristof Engelen Jul 12, 2013
GSE51052
An Integrated Approach Reveals Regulatory Controls on Bacterial Translation Elongation
11 Arvind R Subramaniam May 15, 2014
GSE51582
ChIP-seq investigation of H-NS of Escherichia coli grown in the presence and absence of an antibiotic "Bicyclomycin", a potential inhibitior of transcription termination factor rho.
  • Link icon Escherichia coli str. K-12 substr. MG1655
8 Deepti Chandraprakash Jan 01, 2014
GSE54403
In vivo organization of bacterial transcription initiation complexes at a genome-scale [ChIP-exo]
  • Link icon Escherichia coli str. K-12 substr. MG1655
12 Byung-Kwan Cho Jan 13, 2021
GSE54404
In vivo organization of bacterial transcription initiation complexes at a genome-scale [ChIP-seq]
  • Link icon Escherichia coli str. K-12 substr. MG1655
4 Byung-Kwan Cho Jan 13, 2021
GSE54405
In vivo organization of bacterial transcription initiation complexes at a genome-scale [RNA-seq]
  • Link icon Escherichia coli str. K-12 substr. MG1655
2 Byung-Kwan Cho Jan 13, 2021
GSE54406
In vivo organization of bacterial transcription initiation complexes at a genome-scale [TSS-seq]
  • Link icon Escherichia coli str. K-12 substr. MG1655
4 Byung-Kwan Cho Jan 13, 2021
GSE54899
Deciphering the Fur transcriptional regulatory network highlights its complex role beyond iron metabolism in Escherichia coli [ChIP-Seq]
  • Link icon Escherichia coli str. K-12 substr. MG1655
12 Donghyuk Kim Sep 09, 2014