GEO Browser - GEO

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26 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Caulobacter vibrioides NA1000		SRA Run Selector
GSE126478	Flagellar mutants have reduced pilus synthesis in Caulobacter crescentus	Expression profiling by high throughput sequencing	Caulobacter vibrioides NA1000	9	TXT SRA Run Selector	Yves V Brun	Jul 05, 2019
GSE166765	Plasticity in AAA+ proteases reveals substrate specificity niches	Expression profiling by high throughput sequencing	Caulobacter vibrioides NA1000	9	TXT SRA Run Selector	Peter Chien	Feb 12, 2022
GSE104186	Identification of small RNAs expressed in Caulobacter crescentus in response to DNA damage	Expression profiling by high throughput sequencing	Caulobacter vibrioides NA1000	6	WIG SRA Run Selector	Konrad U. Förstner	Aug 16, 2018
GSE76721	Growth control switch by a DNA damage-inducible toxin-antitoxin system in Caulobacter	Genome binding/occupancy profiling by high throughput sequencing	Caulobacter vibrioides NA1000	4	XLS SRA Run Selector	Antonio Frandi	Feb 17, 2016
GSE79880	Conserved local hypomethylation control during the bacterial cell cycle and by superimposed environmental cues	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Caulobacter vibrioides Caulobacter vibrioides NA1000 Escherichia coli str. K-12 substr. MG1655 Sinorhizobium meliloti Vibrio cholerae O1 biovar El Tor	16	CSV GFF TXT SRA Run Selector	Antonio Frandi	Nov 28, 2016
GSE100657	A bacterial chromosome structuring protein binds overtwisted DNA to stimulate type II topoisomerases and enable DNA replication	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caulobacter vibrioides NA1000	21	WIG SRA Run Selector	Monica S Guo	Sep 13, 2018
GSE85344	ChIP-seq data of RedN-venus from asynchronous and swarmer populations of Caulobacter crescentus NA1000	Genome binding/occupancy profiling by high throughput sequencing	Caulobacter vibrioides NA1000	8	BEDGRAPH SRA Run Selector	Christine Jacobs-Wagner	Aug 11, 2017
GSE102372	An essential regulatory function of the DnaK chaperone dictates the decision between proliferation and maintenance in Caulobacter crescentus	Expression profiling by high throughput sequencing	Caulobacter vibrioides NA1000	7	TXT SRA Run Selector	Kristina Jonas	Dec 13, 2017
GSE162320	The chaperonin GroESL supports the functions of the Z-ring regulators FtsA and FzlA	Expression profiling by high throughput sequencing	Caulobacter vibrioides NA1000	2	XLSX SRA Run Selector	Kristina Jonas	Mar 30, 2021
GSE71860	Identification of the PhoB regulon and role of PhoU in the phosphate-starvation response of Caulobacter crescentus (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Caulobacter vibrioides NA1000	6	WIG SRA Run Selector	Michael Laub	Aug 06, 2016
GSE66811	Rapid pairing and subsequent resegregation of distant homologous loci enables double-strand break repair in bacteria	Other	Caulobacter vibrioides NA1000	2	TXT SRA Run Selector	Tung Ba Khanh Le	Jul 03, 2015
GSE134665	Structural and biochemical analyses of Caulobacter crescentus ParB reveal the role of its N-terminal domain in chromosome segregation	Genome binding/occupancy profiling by high throughput sequencing	Caulobacter vibrioides NA1000 Escherichia coli	27	TXT SRA Run Selector	Tung Ba Khanh Le	Jul 22, 2020
GSE85186	In-phase oscillation of global regulons is orchestrated by a pole-specific organizer	Genome binding/occupancy profiling by high throughput sequencing	Caulobacter vibrioides NA1000	5	XLSX SRA Run Selector	Johann Mignolet	Oct 24, 2016
GSE87171	Identification of a U/Zn/Cu responsive global regulatory two-component system in Caulobacter crescentus [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Caulobacter vibrioides NA1000	3	WIG SRA Run Selector	Dan Park	Dec 21, 2016
GSE54883	The coding and noncoding architecture of the Caulobacter crescentus genome	Expression profiling by high throughput sequencing Other	Caulobacter vibrioides NA1000	4	TXT SRA Run Selector	Jared Michael Schrader	May 29, 2014
GSE57364	The Global Landscape of Transcription Initiation During the Caulobacter Cell Cycle [timecourse]	Expression profiling by high throughput sequencing	Caulobacter vibrioides NA1000	8	TXT SRA Run Selector	Jared Michael Schrader	Oct 16, 2014
GSE57365	The Global Landscape of Transcription Initiation During the Caulobacter Cell Cycle [mapping]	Expression profiling by high throughput sequencing	Caulobacter vibrioides NA1000	2	TXT SRA Run Selector	Jared Michael Schrader	Oct 16, 2014
GSE68200	Ribosome Profiling Reveals Translational Control During the Caulobacter crescentus cell cycle	Expression profiling by high throughput sequencing Other	Caulobacter vibrioides NA1000	12	TXT SRA Run Selector	Jared Michael Schrader	Apr 20, 2016
GSE133522	BR-body enrichment for RNA substrate identification.	Expression profiling by high throughput sequencing	Caulobacter vibrioides NA1000	4	TXT SRA Run Selector	Jared Michael Schrader	Jun 29, 2019
GSE133532	BR-body mutant mRNA half-life profiling.	Expression profiling by high throughput sequencing	Caulobacter vibrioides NA1000	16	TXT SRA Run Selector	Jared Michael Schrader	Jun 29, 2019