| Accession | Title | Series type(s) | Organism(s) | Samples | GDS | Supplementary | Contact | Release date |
|---|---|---|---|---|---|---|---|---|
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Trypanosoma brucei
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SRA Run Selector
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| GSE46160 |
RIP-Seq analysis of Trypanosoma brucei ELAV-like protein Tb927.8.6650
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2 |
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Hamed S Najafabadi | Apr 18, 2013 | ||
| GSE81763 |
Genome wide RNAi screen for regulators of mRNAs silenced in African trypanosome slender forms and expressed in stumpy forms
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2 |
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Alasdair Ivens | Mar 16, 2017 | ||
| GSE56436 |
Nuclear pore complex evolution: A trypanosome Mlp analog functions in chromosomal segregation but lacks transcriptional barrier activity
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3 |
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Alexander Ratushny | Apr 03, 2014 | ||
| GSE186923 |
High-throughput mapping of 2'-O-methylation in Trypanosoma brucei poly(A) RNAs using RibOxi-seq
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3 |
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Christopher L Holley | May 01, 2024 | ||
| GSE81762 |
RNA-seq Transcriptome analysis of REG9.1 (Tb927.11.14220) when overexpression is induced, or not using ectopic expression vector pLEW
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4 |
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Alasdair Ivens | Mar 16, 2017 | ||
| GSE81764 |
RNA-seq Transcriptome analysis of REG9.1 (Tb927.11.14220) when RNAi is induced, or not
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4 |
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Alasdair Ivens | Mar 16, 2017 | ||
| GSE43848 |
iCLIP and NGS to map protein-RNA interactions for U1-snRNP proteins in Trypanosoma brucei
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5 |
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Lee-Hsueh Hung | May 16, 2014 | ||
| GSE57621 |
Regulation of Transcription Termination by Glucosylated Hydroxymethyluracil, Base J, in L. major and T. brucei
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6 |
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robert sabatini | May 18, 2015 | ||
| GSE90593 |
Well-positioned nucleosomes punctuate polycistronic Pol II transcription units and flank silent VSG gene arrays in Trypanosoma brucei
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8 |
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David Johannes Clark | Mar 13, 2017 | ||
| GSE22571 |
Spliced leader trapping reveals widespread alternative splicing patterns in the highly dynamic transcriptome of Trypanosoma brucei
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9 |
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Daniel Nilsson | Jun 25, 2010 | ||
| GSE135708 |
Base J binding protein (JBP3) is a Component of a Novel Trypanosomatid PNUTS-PP1 Phosphatase Complex involved in RNA Pol II Transcription Termination
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10 |
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Robert J Schmitz | Jan 14, 2020 | ||
| GSE59954 |
Genome-wide characterization of the effects of MCMBP deletion in T. brucei
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12 |
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Eric Fritz | Jul 29, 2017 | ||
| GSE69929 |
Histone variant 3 regulates RNA polymerase II transcription termination and dual strand transcription of siRNA loci in Trypanosoma brucei
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12 |
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Robert J Schmitz | Jan 25, 2016 | ||
| GSE102516 |
Profiling of T. brucei rRNA Nm landscape using RibOxi-seq
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12 |
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Gordon G. Carmichael | Dec 31, 2018 | ||
| GSE158584 |
Trypanosoma brucei brucei Doxycycline induced DRBD18 knockdown whole cell RNA and cytoplasmic RNA
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12 |
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Laurie Read | Sep 26, 2020 | ||
| GSE70229 |
Histone variant 3 regulates RNA polymerase II transcription termination and dual strand transcription of siRNA loci in Trypanosoma brucei
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15 | David Reynolds | Jun 30, 2016 | |||
| GSE160713 |
TbSAP is a novel chromatin protein repressing metacyclic Variant Surface Glycoprotein expression sites in bloodstream form Trypanosoma brucei
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15 |
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James Budzak | Nov 04, 2020 | ||
| GSE146506 |
Protein arginine methylation in Trypanosomes
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16 |
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Laurie Read | Mar 07, 2020 | ||
| GSE165034 |
Trypanosoma brucei histones are heavily modified with combinatorial post-translational modifications and mark Pol II transcription start regions with hyperacetylated H2A.
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16 |
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Hugh Patterton | Jan 19, 2021 | ||
| GSE165290 |
Comparative RNAseq analysis of Trypanosoma brucei and T. congolense
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16 | Pieter C Steketee | Jan 22, 2021 |
