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14 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Nomascus leucogenys
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85		BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE161191	Comparative analyses of gibbon centromeres reveal dynamic species-specific shifts in repeat composition [RNA-seq]	Expression profiling by high throughput sequencing	Hoolock leuconedys Hylobates moloch Nomascus leucogenys Symphalangus syndactylus	4		TXT	Mariam Okhovat	May 24, 2021
GSE161217	Comparative analyses of gibbon centromeres reveal dynamic species-specific shifts in repeat composition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Hoolock leuconedys Hylobates moloch Nomascus leucogenys Symphalangus syndactylus	26		FA TXT	Mariam Okhovat	May 24, 2021
GSE161308	Comparative analyses of gibbon centromeres reveal dynamic species-specific shifts in repeat composition [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Hoolock leuconedys Hylobates moloch Nomascus leucogenys Symphalangus syndactylus	22		FA TXT XLSX	Mariam Okhovat	May 24, 2021
GSE136963	Co-option of the lineage-specific LAVA retrotransposon in the gibbon genome [Histone ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Nomascus leucogenys	24		BEDGRAPH SRA Run Selector	Mariam Okhovat	Jul 20, 2020
GSE136964	Co-option of the lineage-specific LAVA retrotransposon in the gibbon genome [PU.1 ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Nomascus leucogenys	4		BEDGRAPH TXT XLSX SRA Run Selector	Mariam Okhovat	Jul 20, 2020
GSE136965	Co-option of the lineage-specific LAVA retrotransposon in the gibbon genome[RNA-Seq]	Expression profiling by high throughput sequencing	Nomascus leucogenys	9		TXT SRA Run Selector	Mariam Okhovat	Jul 20, 2020
GSE136966	Co-option of the lineage-specific LAVA retrotransposon in the gibbon genome [WGS]	Other	Hoolock leuconedys Hylobates lar Hylobates moloch Hylobates muelleri Hylobates pileatus Nomascus gabriellae Nomascus leucogenys Symphalangus syndactylus	23		XLSX SRA Run Selector	Mariam Okhovat	Jul 20, 2020
GSE136968	Co-option of the lineage-specific LAVA retrotransposon in the gibbon genome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Hoolock leuconedys Hylobates lar Hylobates moloch Hylobates muelleri Hylobates pileatus Nomascus gabriellae Nomascus leucogenys Symphalangus syndactylus	60		TXT	Mariam Okhovat	Jul 20, 2020
GSE111733	Continuous-trait probabilistic model for comparing multi-species functional genomic data	Other	Chlorocebus aethiops Homo sapiens Nomascus leucogenys Pan troglodytes Pongo pygmaeus	5		BW SRA Run Selector	Yang Yang	Jun 20, 2018
GSE115062	Epigenetic maintenance of topological domains in the rearranged gibbon genome [Hi-C]	Genome binding/occupancy profiling by high throughput sequencing	Nomascus leucogenys	1		BED SRA Run Selector	Lucia Carbone	May 30, 2018
GSE115063	Epigenetic maintenance of topological domains in the rearranged gibbon genome [WBGS]	Methylation profiling by high throughput sequencing	Macaca mulatta Nomascus leucogenys	2		BEDGRAPH SRA Run Selector	Lucia Carbone	May 30, 2018
GSE115064	Epigenetic maintenance of topological domains in the rearranged gibbon genome [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Nomascus leucogenys	3		BW SRA Run Selector	Lucia Carbone	May 30, 2018
GSE115065	Epigenetic maintenance of topological domains in the rearranged gibbon genome	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Macaca mulatta Nomascus leucogenys	6		BED BEDGRAPH	Lucia Carbone	May 30, 2018