GEO Browser - GEO

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666 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Caenorhabditis elegans		BED
GSE14545	Identification of transcription factor Pha-4 binding regions	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED TXT SRA Run Selector	Flora Vaccarino	Jan 24, 2009
GSE15501	Identification of transcription factor DPY-27 binding sites	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED TXT SRA Run Selector	Flora Vaccarino	Apr 03, 2009
GSE15535	Genome-wide identification of the occupancy of RNA polymerase II (POL II) at L4/young adult stage in C. elegans	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	6	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009
GSE15567	Identification of transcription factor DAF-16 binding sites in C. elegans	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	6	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009
GSE15625	Identification of transcription factor MAB-5 binding sites	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009
GSE15628	RNA polymerase occupancy at embryonic stage and starved L1 stage in pha-4 transgenic worms	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	6	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009
GSE17284	Partitioning the C. elegans genome by nucleosome modification, occupancy, and positioning	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	5	BED TXT SRA Run Selector	Sam Guoping Gu	Aug 31, 2009
GSE18132	Dynamic O-GlcNAc cycling at promoters of C. elegans genes regulating Longevity, Stress, and Immunity	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Other	Caenorhabditis elegans	72	BAR BED CEL CHP	Michael Krause	Jan 01, 2010
GSE18611	O-GlcNAc Chromatin Marks from C. elegans L1 animals	Genome binding/occupancy profiling by genome tiling array Other	Caenorhabditis elegans	45	BAR BED CEL	Michael Krause	Jan 01, 2010
GSE21736	Novel viruses naturally infecting Caenorhabditis nematodes trigger a small RNA response	Non-coding RNA profiling by high throughput sequencing	Caenorhabditis elegans	2	BED SRA Run Selector	Leonard Goldstein	Jan 01, 2011
GSE24241	seq-SDQ3891_LEM2_N2_MXemb	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	3	BED SAM TXT SRA Run Selector	Everett Zhou	Sep 21, 2010
GSE24318	seq-WA30534819_H3K4me3_N2_MXemb	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED SAM TXT SRA Run Selector	Everett Zhou	Sep 24, 2010
GSE24924	Formation, regulation and evolution of 3' UTRs in Caenorhabditis elegans	Expression profiling by high throughput sequencing	Caenorhabditis elegans	10	BED TXT SRA Run Selector	calvin jan	Dec 24, 2010
GSE25933	Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2	Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by genome tiling array	Caenorhabditis elegans	31	BED GFF GFF3 PAIR SAM TXT WIG	DCC modENCODE	Dec 22, 2010
GSE26795	Encyclopedia of C. elegans 3' UTRs and their regulatory elements - 454 sequencing of RACE clones	Expression profiling by high throughput sequencing	Caenorhabditis elegans	2	BED FNA QUAL SAM XML SRA Run Selector	Kristin C Gunsalus	Jan 21, 2011
GSE28350	Genome-wide identification of DAF-12 binding sites in Caenorhabditis elegans	Genome binding/occupancy profiling by genome tiling array	Caenorhabditis elegans	4	BAR BED CEL	Alfred L Fisher	Apr 05, 2011
GSE28617	Function, targets and evolution of Caenorhabditis elegans piRNAs (small RNA-Seq)	Non-coding RNA profiling by high throughput sequencing	Caenorhabditis elegans	7	BED SRA Run Selector	Leonard Goldstein	Jun 18, 2012
GSE29896	Histone Demethylase UTX-1 Regulates the Caenorhabditis elegans Lifespan by Targeting the Insulin/IGF-1 Signaling Pathway	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	3	BED SRA Run Selector	Dali Han	Nov 22, 2011
GSE32165	Analysis of Caenorhabditis elegans intestinal gene expression and alternative polyadenylation using fluorescence-activated nuclei sorting (FANS) and 3' end deep sequencing (3'end-seq)	Expression profiling by high throughput sequencing	Caenorhabditis elegans	2	BED SRA Run Selector	Zhe Ji	Dec 01, 2011
GSE32631	Amplification of siRNA in Caenorhabditis elegans generates a transgenerational sequence-targeted histone H3 lysine 9 methylation footprint	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Caenorhabditis elegans	27	BED SRA Run Selector	Sam Guoping Gu	Jan 06, 2012