GEO Browser - GEO

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6538 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Drosophila melanogaster
GSE169088	3D genomics across the tree of life reveals condensin II as a determinant of architecture type	Other	Acropora millepora Aedes aegypti Agaricus bisporus Aplysia californica Arachis hypogaea Branchiostoma lanceolatum Caenorhabditis elegans Chiloscyllium punctatum Ciona intestinalis Clonorchis sinensis Cristatella mucedo Culex quinquefasciatus Drosophila melanogaster Gallus gallus Homo sapiens Hypsibius dujardini Lethenteron camtschaticum Muntiacus muntjak Muntiacus reevesi Notamacropus eugenii Pleurobrachia bachei Pygocentrus nattereri Python bivittatus Saccharomyces cerevisiae Strongylocentrotus purpuratus Triticum aestivum Xenopus laevis	32	BEDPE FASTA HIC VCF WIG SRA Run Selector	Olga Dudchenko	Apr 23, 2021
GSE33595	The mosquito Aedes aegypti has a large genome size and high transposable element load but contains a low proportion of transposon-specific piRNAs	Non-coding RNA profiling by high throughput sequencing	Aedes aegypti Drosophila melanogaster	8	BAM TXT SRA Run Selector	Peter Arensburger	Mar 18, 2014
GSE103034	miRNA expression in Anopheles gambiae tissues	Non-coding RNA profiling by array	Aedes aegypti Anopheles gambiae Apis mellifera Bombyx mori Culex quinquefasciatus Drosophila melanogaster Tribolium castaneum	40	TXT	Lena Lampe	Aug 25, 2017
GSE205498	Transcriptomic evolution across bilaterian tissues	Expression profiling by high throughput sequencing	Aedes aegypti Blattella germanica Bombyx mori Branchiostoma lanceolatum Callorhinchus milii Cloeon dipterum Danio rerio Drosophila melanogaster Episyrphus balteatus Monodelphis domestica Octopus bimaculoides Strigamia maritima Strongylocentrotus purpuratus Tribolium castaneum Xenopus tropicalis	89	TSV	Federica Mantica	Oct 12, 2022
GSE70185	The mid-developmental transition and the evolution of animal body plans	Expression profiling by high throughput sequencing	Amphimedon queenslandica Caenorhabditis elegans Danio rerio Drosophila melanogaster Hypsibius dujardini Mnemiopsis leidyi Nematostella vectensis Platynereis dumerilii Schmidtea polychroa Strongylocentrotus purpuratus	1143	PDF XLSX	Itai Yanai	Feb 18, 2016
GSE35606	miR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells (miRNA)	Non-coding RNA profiling by array	Anopheles gambiae Apis mellifera Arabidopsis thaliana Ateles geoffroyi Betapolyomavirus macacae Bombyx mori Bos taurus Caenorhabditis briggsae Caenorhabditis elegans Canis lupus familiaris Danio rerio Drosophila melanogaster Drosophila pseudoobscura Gallid alphaherpesvirus 2 Gallus gallus Glycine max Gorilla gorilla Homo sapiens Human betaherpesvirus 5 Human gammaherpesvirus 8 Lagothrix lagotricha Lemur catta Macaca mulatta Macaca nemestrina Macacine gammaherpesvirus 4 Medicago truncatula Monodelphis domestica Murid gammaherpesvirus 4 Mus musculus Oryza sativa Ovis aries Pan paniscus Pan troglodytes Physcomitrium patens Pongo pygmaeus Populus trichocarpa Rattus norvegicus Saccharum officinarum Saguinus labiatus Schmidtea mediterranea Sorghum bicolor Sus scrofa Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis Zea mays human gammaherpesvirus 4	4	GPR	Janet M. Young	Apr 02, 2012
GSE35921	miR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells	Expression profiling by array Non-coding RNA profiling by array	Anopheles gambiae Apis mellifera Arabidopsis thaliana Ateles geoffroyi Betapolyomavirus macacae Bombyx mori Bos taurus Caenorhabditis briggsae Caenorhabditis elegans Canis lupus familiaris Danio rerio Drosophila melanogaster Drosophila pseudoobscura Gallid alphaherpesvirus 2 Gallus gallus Glycine max Gorilla gorilla Homo sapiens Human betaherpesvirus 5 Human gammaherpesvirus 8 Lagothrix lagotricha Lemur catta Macaca mulatta Macaca nemestrina Macacine gammaherpesvirus 4 Medicago truncatula Monodelphis domestica Murid gammaherpesvirus 4 Mus musculus Oryza sativa Ovis aries Pan paniscus Pan troglodytes Physcomitrium patens Pongo pygmaeus Populus trichocarpa Rattus norvegicus Saccharum officinarum Saguinus labiatus Schmidtea mediterranea Sorghum bicolor Sus scrofa Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis Zea mays human gammaherpesvirus 4	16	GPR	Janet M. Young	Apr 02, 2012
GSE153775	Two distinct mechanisms for X chromosome dosage compensation in Anopheles and Drosophila [RNA-seq]	Expression profiling by high throughput sequencing	Anopheles gambiae Drosophila melanogaster	20	TXT SRA Run Selector	Asifa Akhtar	May 31, 2021
GSE153780	Two distinct mechanisms for X chromosome dosage compensation in Anopheles and Drosophila	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anopheles gambiae Drosophila melanogaster	32	BW	Asifa Akhtar	May 31, 2021
GSE19824	Genome-wide evolutionary analysis of eukaryotic DNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera Bombyx mori Chlorella variabilis Ciona intestinalis Coprinopsis cinerea Drosophila melanogaster Laccaria bicolor Nematostella vectensis Oryza sativa Phycomyces blakesleeanus Physcomitrium patens Postia placenta Selaginella moellendorffii Tetraodon nigroviridis Tribolium castaneum Uncinocarpus reesii Volvox carteri	33	GFF TXT SRA Run Selector	Toshiro Nishimura	Apr 15, 2010
GSE9449	miRNA expression profiling during C2C12 myogenesis	Non-coding RNA profiling by array	Arabidopsis thaliana Bos taurus Caenorhabditis elegans Drosophila melanogaster Gallus gallus Homo sapiens Macaca mulatta Mus musculus Rattus norvegicus	5	TXT	Chung Fai Wong	Jun 30, 2008
GSE18628	MicroRNA profiling shows different response to retinoids in estrogen-receptor positive and negative cells	Non-coding RNA profiling by array	Arabidopsis thaliana Bos taurus Caenorhabditis elegans Drosophila melanogaster Gallus gallus Homo sapiens Macaca mulatta Mus musculus Rattus norvegicus Saccharomyces cerevisiae	24	SPOT	Anna Tsykin	May 21, 2010
GSE18693	Effects of retinoids on estrogen-receptor-positive and -negative breast carcinoma cells: mRNA and miRNA profiling	Expression profiling by array Non-coding RNA profiling by array	Arabidopsis thaliana Bos taurus Caenorhabditis elegans Drosophila melanogaster Gallus gallus Homo sapiens Macaca mulatta Mus musculus Rattus norvegicus Saccharomyces cerevisiae	32	SPOT TXT	Maddalena Fratelli	May 21, 2010
GSE18808	A methyl transferase links the circadian clock to the regulation of alternative splicing	Expression profiling by array Expression profiling by genome tiling array	Arabidopsis thaliana Drosophila melanogaster	18	CEL	Marcelo Javier Yanovsky	Aug 24, 2010
GSE52809	Poly(A)-tail profiling reveals an embryonic switch in translational control	Expression profiling by high throughput sequencing	Arabidopsis thaliana Danio rerio Drosophila melanogaster Homo sapiens Mus musculus Saccharomyces cerevisiae Schizosaccharomyces pombe Xenopus laevis	64	TXT SRA Run Selector	Stephen Eichhorn	Jan 29, 2014
GSE59978	Small RNA profiling of Arabidopsis in response to fungal elicitors	Non-coding RNA profiling by array	Arabidopsis thaliana Caenorhabditis elegans Drosophila melanogaster	12	GPR	Jose Luis Riechmann	Dec 01, 2014
GSE68860	Genome-wide single-molecule sequencing of 6-methyladenine in eukaryotes	Methylation profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana Auricularia delicata Caenorhabditis elegans Chlamydomonas reinhardtii Drosophila melanogaster Nannochloropsis oceanica Saccharomyces cerevisiae	11	BW CSV GFF SRA Run Selector	Denis Tolkunov	Sep 01, 2017
GSE110582	Whole genome mapping of DNA G-quadruplexes in multiple species by G4-seq	Other	Arabidopsis thaliana Caenorhabditis elegans Cereibacter sphaeroides Danio rerio Drosophila melanogaster Escherichia coli Homo sapiens Leishmania major Mus musculus Plasmodium falciparum Saccharomyces cerevisiae Trypanosoma brucei	24	BED BEDGRAPH SRA Run Selector	Giovanni Marsico	Aug 01, 2018
GSE116502	A conserved odor detection pathway via modulation of chromatin and cellular gene expression	Expression profiling by high throughput sequencing	Arabidopsis thaliana Drosophila melanogaster Mus musculus	34	TSV SRA Run Selector	Christi Ann Scott	Jul 28, 2020
GSE119128	An unbiased Boolean analysis of public gene expression data for core cell cycle gene classification	Expression profiling by array Third-party reanalysis	Arabidopsis thaliana Drosophila melanogaster Homo sapiens Mus musculus			Debashis Sahoo	Aug 29, 2018