GEO Browser - GEO

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21 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Drosophila melanogaster			Jorja Henikoff
GSE3031	Genome-scale profiling of histone H3.3 replacement patterns in Drosophila S2 cells	Genome binding/occupancy profiling by array Genome binding/occupancy profiling by genome tiling array	Drosophila melanogaster	11	BEDGRAPH	Jorja Henikoff	Sep 11, 2005
GSE4091	Histone turnover mediates epigenetic processes in Drosophila S2 cells	Genome binding/occupancy profiling by genome tiling array	Drosophila melanogaster	6	BEDGRAPH GFF	Jorja Henikoff	Dec 01, 2007
GSE6234	Histone turnover marks the boundaries of cis-regulatory domains	Genome binding/occupancy profiling by genome tiling array	Drosophila melanogaster	11	BEDGRAPH GFF	Jorja Henikoff	Mar 01, 2007
GSE13217	Genome-wide profiling of salt fractions maps physical properties of chromatin	Genome binding/occupancy profiling by genome tiling array	Drosophila melanogaster	47	BEDGRAPH CEL GFF PAIR TXT	Jorja Henikoff	Dec 12, 2008
GSE19788	CATCH-IT method for measuring nucleosome turnover	Genome binding/occupancy profiling by genome tiling array	Drosophila melanogaster	12	BEDGRAPH GFF PAIR PDF	Jorja Henikoff	May 27, 2010
GSE21416	Baculovirus-encoded protein expression for epigenomic profiling in Drosophila cells	Genome binding/occupancy profiling by genome tiling array	Drosophila melanogaster	2	BEDGRAPH GFF PAIR TXT	Jorja Henikoff	Jul 12, 2010
GSE21615	Genomic maps of homotypic H2Av, heterotypic H2Av, input and 80mM salt soluble chromatin from Drosophila S2 cells	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	9	BEDGRAPH RTF TXT WIG SRA Run Selector	Jorja Henikoff	Nov 01, 2010
GSE30755	Genome-wide reductions in active chromatin, paused RNA Polymerase II and nucleosome turnover during heat shock	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	18	BED BEDGRAPH SAM TXT SRA Run Selector	Jorja Henikoff	Nov 15, 2011
GSE44200	Mot1 redistributes TBP from TATA-containing to TATA-less promoters	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Saccharomyces cerevisiae	20	BED BEDGRAPH WIG SRA Run Selector	Jorja Henikoff	Oct 21, 2013
GSE45672	High-resolution mapping of transcription factor binding sites on native chromatin	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Saccharomyces cerevisiae	24	BED BEDGRAPH RTF SRA Run Selector	Jorja Henikoff	Dec 14, 2013
GSE47795	RNA Polymerase-II-generated DNA supercoils destabilize nucleosomes	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	25	BED RTF TXT WIG SRA Run Selector	Jorja Henikoff	Oct 31, 2013
GSE49106	Nucleosomes are context-specific, H2A.Z modulated barriers to RNA polymerase	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	12	BED WIG XML SRA Run Selector	Jorja Henikoff	Mar 06, 2014
GSE67454	A simple method for generating high-resolution maps of genome wide protein binding	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	5	BED WIG SRA Run Selector	Jorja Henikoff	Jun 12, 2015
GSE76120	Transcriptional regulators compete with nucleosomes post-replication	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	24	BED WIG SRA Run Selector	Jorja Henikoff	Apr 07, 2016
GSE98351	RNAPII transit through nucleosomes in vivo produces hexasomal intermediates	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	6	BED RTF SRA Run Selector	Jorja Henikoff	Dec 22, 2017
GSE105100	Simple and Complex Centromeric Satellites in Drosophila Sibling Species	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila simulans	19	FASTA RTF SRA Run Selector	Jorja Henikoff	Jan 08, 2018
GSE161919	The H3.3K27M oncohistone antagonizes reprogramming in Drosophila	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	107	BED BEDGRAPH SRA Run Selector	Jorja Henikoff	Jun 15, 2021
GSE193224	A giant virus genome is densely packaged by stable nucleosomes	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Marseillevirus marseillevirus synthetic construct	117	BED BEDGRAPH BIGWIG FASTA PDF	Jorja Henikoff	Sep 27, 2022
GSE195654	Profiling RNA at chromatin targets in situ by antibody-targeted tagmentation.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	95	BEDGRAPH BW DOCX PDF	Jorja Henikoff	Jul 18, 2022
GSE221252	Aclarubicin stimulates RNA polymerase II elongation at closely spaced divergent promoters	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	77	BW	Jorja Henikoff	May 04, 2023