GEO Browser - GEO

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27 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Drosophila mojavensis
GSE6640	Profiling of sex-biased expression in Drosophila species	Expression profiling by genome tiling array	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila yakuba	72	FTR	Brian Oliver	Nov 08, 2007
GSE28078	mRNA-Seq of whole flies from Drosophila	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila yakuba	32	BAM RPKM TXT SRA Run Selector	Brian Oliver	Mar 23, 2011
GSE44612	Comparative Validation of the D. melanogaster Encyclopedia of DNA Elements Transcript Models	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila biarmipes Drosophila bipectinata Drosophila elegans Drosophila eugracilis Drosophila ficusphila Drosophila kikkawai Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila rhopaloa Drosophila simulans Drosophila takahashii Drosophila virilis Drosophila yakuba	93	BAM BED RPKM TXT	Brian Oliver	Feb 25, 2013
GSE59707	Evolutionary changes in cis regulation are associated with altered chromatin activity and gene expression levels in the Drosophila eye development (RNA-Seq)	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	27	TXT SRA Run Selector	Stein Aerts	May 02, 2020
GSE98013	Small RNAs from 11 Drosophila species	Non-coding RNA profiling by high throughput sequencing	Drosophila ananassae Drosophila erecta Drosophila grimshawi Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	56	TXT SRA Run Selector	Jaaved Mohammed	Nov 20, 2017
GSE99574	RNA-seq of sexed adult tissues/body parts from eight Drosophila species	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila virilis Drosophila willistoni Drosophila yakuba synthetic construct	856	PDF TXT SRA Run Selector	Brian Oliver	Jun 02, 2017
GSE102439	The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes [evolutionary study]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila ananassae Drosophila erecta Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	24	BW SRA Run Selector	Jelle Jacobs	Jun 04, 2018
GSE102441	The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes	Genome binding/occupancy profiling by high throughput sequencing	Drosophila ananassae Drosophila erecta Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba Homo sapiens	175	BW	Jelle Jacobs	Jun 04, 2018
GSE112858	Evolution of maternal and zygotic mRNA complements in the early Drosophila embryo	Expression profiling by high throughput sequencing Third-party reanalysis	Drosophila ananassae Drosophila erecta Drosophila mauritiana Drosophila melanogaster Drosophila miranda Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila santomea Drosophila sechellia Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	119	TXT	Susan E. Lott	Dec 04, 2018
GSE225887	Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus [RNA-Seq]	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila azteca Drosophila biarmipes Drosophila bifasciata Drosophila erecta Drosophila ficusphila Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila simulans Drosophila subobscura Drosophila suzukii Drosophila takahashii Drosophila virilis Drosophila yakuba	35	BW	Susanne Bornelöv	Sep 26, 2023
GSE225888	Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus [small RNA-Seq]	Non-coding RNA profiling by high throughput sequencing	Drosophila ananassae Drosophila azteca Drosophila biarmipes Drosophila bifasciata Drosophila erecta Drosophila ficusphila Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila simulans Drosophila subobscura Drosophila suzukii Drosophila takahashii Drosophila virilis Drosophila yakuba	65	BW	Susanne Bornelöv	Sep 26, 2023
GSE225889	Unistrand piRNA clusters are an evolutionarily conserved mechanism to suppress endogenous retroviruses across the Drosophila genus	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila ananassae Drosophila azteca Drosophila biarmipes Drosophila erecta Drosophila ficusphila Drosophila melanogaster Drosophila mojavensis Drosophila persimilis Drosophila pseudoobscura Drosophila simulans Drosophila subobscura Drosophila suzukii Drosophila takahashii Drosophila virilis Drosophila yakuba	118	BW NARROWPEAK	Susanne Bornelöv	Sep 26, 2023
GSE101664	TRANSCRIPTIONAL RESPONSES OF ECOLOGICALLY DIVERSE DROSOPHILA SPECIES TO LARVAL DIETS DIFFERING IN RELATIVE SUGAR AND PROTEIN RATIOS	Expression profiling by high throughput sequencing	Drosophila arizonae Drosophila melanogaster Drosophila mojavensis	18	DIFF TXT SRA Run Selector	NESTOR OCTAVIO NAZARIO-YEPIZ	Jul 20, 2017
GSE213369	Mechanistic divergence of piRNA biogenesis in Drosophila [ncRNA-seq]	Non-coding RNA profiling by high throughput sequencing	Drosophila bifasciata Drosophila eugracilis Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura	17	BED TXT	Rippei Hayashi	Sep 19, 2022
GSE213383	Mechanistic divergence of piRNA biogenesis in Drosophila	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila bifasciata Drosophila eugracilis Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura	27	BED TXT	Rippei Hayashi	Sep 19, 2022
GSE23309	Sex-biased expression in heads of three Drosophila species	Expression profiling by array	Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura	24	FTR PAIR TXT	Brian Oliver	Jul 30, 2010
GSE5148	Functional genomics of cactus host shifts in Drosophila mojavensis	Expression profiling by array	Drosophila mojavensis	10		Luciano Matias Matzkin	Jan 24, 2007
GSE16234	Transcriptional regulation of metabolism associated with desiccation resistance of the cactophilic Drosophila mojavensis	Expression profiling by array	Drosophila mojavensis	16	PAIR	Luciano Matias Matzkin	May 21, 2010
GSE20882	mRNA-Seq of head tissue from Drosophila mojavensis	Expression profiling by high throughput sequencing	Drosophila mojavensis	4	TXT SRA Run Selector	Brian Oliver	Apr 11, 2010
GSE27454	Postmating transcriptional changes in reproductive tracts of con- and heterospecifically-mated Drosophila mojavensis females	Expression profiling by array	Drosophila mojavensis	14	TXT	Luciano Matias Matzkin	Jan 01, 2012