GEO Browser - GEO

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57 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Drosophila pseudoobscura
GSE2840	No accelerated rate of protein evolution in male biased Drosophila pseudoobscura genes	Expression profiling by SAGE	Drosophila pseudoobscura	2		Schlötterer Christian	Jul 27, 2006
GSE6640	Profiling of sex-biased expression in Drosophila species	Expression profiling by genome tiling array	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila yakuba	72	FTR	Brian Oliver	Nov 08, 2007
GSE10515	The birth and death of microRNA genes in Drosophila	Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans	3		Chung-I Wu	Feb 14, 2008
GSE13677	Drosophila pseudoobscura and Drosophila simulans small RNAs	Non-coding RNA profiling by high throughput sequencing	Drosophila pseudoobscura Drosophila simulans	3	SRA Run Selector	Eugene Berezikov	Nov 24, 2009
GSE16651	Characterization of Drosophila mitochondrial transcripts through high throughput EST data	Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura	4	FNA QUAL TXT	Tatiana Teixeira Torres	Dec 09, 2009
GSE17192	Evolution of sex-dependent gene expression in three recently diverged species of Drosophila	Expression profiling by array	Drosophila persimilis Drosophila pseudoobscura Drosophila pseudoobscura bogotana	18	GPR	Carlos Alberto Machado	Jan 12, 2010
GSE19989	mRNA-Seq of head tissue from Drosophila pseudoobscura	Expression profiling by high throughput sequencing	Drosophila pseudoobscura	2	TXT SRA Run Selector	Brian Oliver	Jan 26, 2010
GSE23309	Sex-biased expression in heads of three Drosophila species	Expression profiling by array	Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura	24	FTR PAIR TXT	Brian Oliver	Jul 30, 2010
GSE23537	modENCODE_White Lab: genome-wide ChIP-chip and ChIP-Seq data	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila yakuba	247	BAR BED BEDGRAPH CEL GFF WIG SRA Run Selector	Kevin P. White	Aug 11, 2010
GSE25665	modENCODE_White Lab: genome-wide ChIP data of H3K27me3 from D.pse_E0-4h on Illumina Genome Analyzer.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila pseudoobscura	2	BED BEDGRAPH	Kevin P. White	Feb 15, 2011
GSE25666	modENCODE_White Lab: genome-wide ChIP data of KW3-Psq-D2 from D.pse_E0-4h on Illumina Genome Analyzer.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila pseudoobscura	2	BED BEDGRAPH	Kevin P. White	Feb 15, 2011
GSE25667	modENCODE_White Lab: genome-wide ChIP data of KW3-Trl-D2 from D.pse_E0-4h on Illumina Genome Analyzer.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila pseudoobscura	2	BED BEDGRAPH	Kevin P. White	Feb 15, 2011
GSE25668	modENCODE_White Lab: genome-wide ChIP data of H3K27me3 from D.pse_WPP on Illumina Genome Analyzer.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila pseudoobscura	2	BED BEDGRAPH	Kevin P. White	Feb 15, 2011
GSE28078	mRNA-Seq of whole flies from Drosophila	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila yakuba	32	BAM RPKM TXT SRA Run Selector	Brian Oliver	Mar 23, 2011
GSE31302	RNA-Seq of Gonads and Carcasses in D. simulans and D. pseudoobscura	Expression profiling by high throughput sequencing	Drosophila pseudoobscura Drosophila simulans	17	BAM SRA Run Selector	Brian Oliver	Aug 26, 2011
GSE35606	miR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells (miRNA)	Non-coding RNA profiling by array	Anopheles gambiae Apis mellifera Arabidopsis thaliana Ateles geoffroyi Betapolyomavirus macacae Bombyx mori Bos taurus Caenorhabditis briggsae Caenorhabditis elegans Canis lupus familiaris Danio rerio Drosophila melanogaster Drosophila pseudoobscura Gallid alphaherpesvirus 2 Gallus gallus Glycine max Gorilla gorilla Homo sapiens Human betaherpesvirus 5 Human gammaherpesvirus 8 Lagothrix lagotricha Lemur catta Macaca mulatta Macaca nemestrina Macacine gammaherpesvirus 4 Medicago truncatula Monodelphis domestica Murid gammaherpesvirus 4 Mus musculus Oryza sativa Ovis aries Pan paniscus Pan troglodytes Physcomitrium patens Pongo pygmaeus Populus trichocarpa Rattus norvegicus Saccharum officinarum Saguinus labiatus Schmidtea mediterranea Sorghum bicolor Sus scrofa Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis Zea mays human gammaherpesvirus 4	4	GPR	Janet M. Young	Apr 02, 2012
GSE35921	miR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells	Expression profiling by array Non-coding RNA profiling by array	Anopheles gambiae Apis mellifera Arabidopsis thaliana Ateles geoffroyi Betapolyomavirus macacae Bombyx mori Bos taurus Caenorhabditis briggsae Caenorhabditis elegans Canis lupus familiaris Danio rerio Drosophila melanogaster Drosophila pseudoobscura Gallid alphaherpesvirus 2 Gallus gallus Glycine max Gorilla gorilla Homo sapiens Human betaherpesvirus 5 Human gammaherpesvirus 8 Lagothrix lagotricha Lemur catta Macaca mulatta Macaca nemestrina Macacine gammaherpesvirus 4 Medicago truncatula Monodelphis domestica Murid gammaherpesvirus 4 Mus musculus Oryza sativa Ovis aries Pan paniscus Pan troglodytes Physcomitrium patens Pongo pygmaeus Populus trichocarpa Rattus norvegicus Saccharum officinarum Saguinus labiatus Schmidtea mediterranea Sorghum bicolor Sus scrofa Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis Zea mays human gammaherpesvirus 4	16	GPR	Janet M. Young	Apr 02, 2012
GSE35648	ChIP-seq study of BEAF binding in four Drosophila spcies	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila virilis	8	BED SRA Run Selector	Jingping Yang	Aug 03, 2012
GSE24449	Genome-wide comparative ChIP-seq data of CTCF and RNA-seq data in Drosophila white prepupa on Illumina Genome Analyzer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila yakuba	21	BED TXT WIG SRA Run Selector	Kevin P. White	Nov 08, 2012
GSE17452	Aberrant gene expression in Drosophila hybrids supporting faster-male evolution	Expression profiling by array	Drosophila persimilis x Drosophila pseudoobscura Drosophila pseudoobscura Drosophila pseudoobscura bogotana x Drosophila pseudoobscura pseudoobscura Drosophila pseudoobscura pseudoobscura x Drosophila pseudoobscura bogotana Drosophila pseudoobscura x Drosophila persimilis	24	GPR	Carlos Alberto Machado	Feb 02, 2013