GEO Browser - GEO

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28 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Drosophila virilis		TXT
GSE22067	Small RNA-based silencing strategies for transposons in the process of invading Drosophila species	Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster Drosophila virilis	48	TXT SRA Run Selector	Nikolay V Rozhkov	Jul 19, 2010
GSE28078	mRNA-Seq of whole flies from Drosophila	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila yakuba	32	BAM RPKM TXT SRA Run Selector	Brian Oliver	Mar 23, 2011
GSE31103	Changes in gene expression during cold exposure in Drosophila montana and D. virilis	Expression profiling by array	Drosophila montana Drosophila virilis	24	TXT	Laura Vesala	Oct 01, 2011
GSE39782	Tag-seq profiling in eye-antennal and wing imaginal discs of D. melanogaster, D. yakuba and D. virilis	Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila virilis Drosophila yakuba	6	TXT SRA Run Selector	Stein Aerts	Sep 21, 2012
GSE39784	Tag-seq in eye-antennal and wing imaginal discs of D.melanogaster, D.yakuba, and D.virilis; RNA-seq in wild-type and glass mutant D.melanogaster eye-antennal imaginal discs.	Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila virilis Drosophila yakuba	10	TXT	Stein Aerts	Sep 21, 2012
GSE44612	Comparative Validation of the D. melanogaster Encyclopedia of DNA Elements Transcript Models	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila biarmipes Drosophila bipectinata Drosophila elegans Drosophila eugracilis Drosophila ficusphila Drosophila kikkawai Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila rhopaloa Drosophila simulans Drosophila takahashii Drosophila virilis Drosophila yakuba	93	BAM BED RPKM TXT	Brian Oliver	Feb 25, 2013
GSE50766	Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression (part 1)	Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila virilis Drosophila yakuba	26	GTF TXT SRA Run Selector	Mathilde PARIS	Sep 12, 2013
GSE50771	Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression (part 2)	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila virilis	16	TXT SRA Run Selector	Mathilde PARIS	Sep 12, 2013
GSE50773	Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila virilis Drosophila yakuba	42	GTF TXT	Mathilde PARIS	Sep 12, 2013
GSE54009	Small RNA expression throughout the development of Drosophila virilis	Non-coding RNA profiling by high throughput sequencing	Drosophila virilis	11	TXT SRA Run Selector	Maria Ninova	Jan 13, 2014
GSE58925	Transcriptome changes associated with cold acclimation in two species of the Drosophila virilis group	Expression profiling by high throughput sequencing	Drosophila montana Drosophila virilis	10	TXT SRA Run Selector	Darren James Parker	Dec 27, 2014
GSE59706	Identification of lineage-specific cis-regulatory modules associated with variation in transcription factor binding and chromatin activity using Ornstein-Uhlenbeck models	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila virilis	4	BW TXT SRA Run Selector	Stein Aerts	Jun 17, 2015
GSE59707	Evolutionary changes in cis regulation are associated with altered chromatin activity and gene expression levels in the Drosophila eye development (RNA-Seq)	Expression profiling by high throughput sequencing	Drosophila ananassae Drosophila melanogaster Drosophila mojavensis Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila willistoni Drosophila yakuba	27	TXT SRA Run Selector	Stein Aerts	May 02, 2020
GSE60428	Cooperativity, specificity and evolutionary stability of Polycomb targeting in Drosophila	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila yakuba	70	BED BEDGRAPH TXT SRA Run Selector	Bernd Schuettengruber	Oct 20, 2014
GSE61222	RNA profiling in Drosophila virilis and Drosophila yakuba	Expression profiling by high throughput sequencing	Drosophila virilis Drosophila yakuba	2	TXT SRA Run Selector	Christos Samakovlis	Jan 29, 2015
GSE62556	The evolution of genic piRNA cluster loci expression patterns	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila erecta Drosophila melanogaster Drosophila virilis Drosophila yakuba Mus musculus Oryctolagus cuniculus Rattus norvegicus	25	TXT SRA Run Selector	NELSON LAU	Nov 01, 2015
GSE63770	Embryonic small RNA and RNA profiles of Tribolium castaneum and Drosophila oocytes	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster Drosophila virilis Tribolium castaneum	22	TXT SRA Run Selector	Maria Ninova	Mar 01, 2015
GSE68062	Sex bias and maternal contribution to gene expression divergence in Drosophila blastoderm embryos	Expression profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila virilis Drosophila yakuba	31	TXT SRA Run Selector	Mathilde Paris	Apr 21, 2015
GSE69202	Seasonal gene expression kinetics between diapause phases in Drosophila virilis group speciesand overwintering differences between diapausing and non-diapausing females	Expression profiling by array	Drosophila montana Drosophila virilis	23	TXT	Tiina Susanna Salminen	Jun 03, 2015
GSE86055	Evolution of A-to-I RNA Editing in Drosophila	Expression profiling by high throughput sequencing Other	Drosophila ananassae Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila virilis Drosophila yakuba	52	TXT SRA Run Selector	Jin Billy Li	Jan 04, 2017