51 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterStrongylocentrotus purpuratus
GSE223913
Pol II pausing is a milestone on the road to complex animals
46 Alexandra Georgiana Chivu Feb 05, 2024
GSE246430
Conservation and contrast in cell states of echinoderm ovaries
3 Nathalie Oulhen Nov 29, 2023
GSE240882
Molecular characterization of the sea urchin larva photosensory system: Insights into the evolution of a Go-Opsin positive neuronal population
  • Link icon Strongylocentrotus purpuratus
2 Maria Ina Arnone Sep 13, 2023
GSE241045
Single-cell RNA sequencing of the Strongylocentrotus purpuratus larva reveals the blueprint of major cell types and nervous system of a non-chordate deuterostome
  • Link icon Strongylocentrotus purpuratus
6 Maria Ina Arnone Aug 17, 2023
GSE240144
single nucleus RNA-seq of early development S. purpuratus
  • Link icon Strongylocentrotus purpuratus
4 Hinman Veronica Aug 07, 2023
GSE240146
single nucleus RNA-seq of early development in P. miniata and S. purpuratus
7 Hinman Veronica Aug 07, 2023
GSE234139
Accessibility and activity of transcriptional regulatory elements during sea urchin embryogenesis and differentiation [ATAC-seq]
  • Link icon Strongylocentrotus purpuratus
15 Cesar Arenas-Mena Jul 27, 2023
GSE234140
Accessibility and activity of transcriptional regulatory elements during sea urchin embryogenesis and differentiation [PRO-seq]
  • Link icon Strongylocentrotus purpuratus
17 Cesar Arenas-Mena Jul 27, 2023
GSE234143
Widespread priming of transcriptional regulatory elements by incipient accessibility or Pol II pause in early embryos of the sea urchin Strongylocentrotus purpuratus
  • Link icon Strongylocentrotus purpuratus
32 Cesar Arenas-Mena Jul 27, 2023
GSE205498
Transcriptomic evolution across bilaterian tissues
89 Federica Mantica Oct 12, 2022
GSE198320
An ancestral Wnt-Brachyury feedback loop and vertebrate-specific recruitment of mesoderm-determining target genes revealed by comparative Brachyury target screens
  • Link icon Strongylocentrotus purpuratus
10 Maria Ina Arnone Aug 01, 2022
GSE195869
Comparative analysis of genome-scale, base-resolution DNA methylation profiles across 580 animal species
3023 Christoph Bock Jun 18, 2022
GSE188331
Base-resolution DNA hydroxymethylation maps of purple sea urchin (Strongylocentrotus purpuratus), european lancelet (Branchiostoma lanceolatum) and zebrafish (Danio rerio) using ACE-seq
15 Ksenia Skvortsova Nov 08, 2021
GSE188332
DNA hydroxymethylation profiling of purple sea urchin (Strongylocentrotus purpuratus), european lancelet (Branchiostoma lanceolatum) and zebrafish (Danio rerio) using hMeDIP-seq
8 Ksenia Skvortsova Nov 08, 2021
GSE188333
Base-resolution DNA methylation maps of purple sea urchin (Strongylocentrotus purpuratus)
  • Link icon Strongylocentrotus purpuratus
8 Ksenia Skvortsova Nov 08, 2021
GSE188334
Base-resolution 5-hydroxymethylcytosine maps of sea urchin and lancelet embryos and adult tissues
31 Ksenia Skvortsova Nov 08, 2021
GSE186363
Developmental dynamics of sea urchin and sea star cis-regulation and the evolution of echinoderm genome organization
  • Link icon Strongylocentrotus purpuratus
2 Marta Silvia Magri Oct 24, 2021
GSE169227
Global patterns of enhancer activity during sea urchin embryogenesis assessed by eRNA profiling
  • Link icon Strongylocentrotus purpuratus
9 Jian Ming Khor Jun 30, 2021
GSE160460
PRO-seq, ATAC-seq, and Pol II ChIP-seq in 20 hour sea urchin embryos (PRO-Seq)
  • Link icon Strongylocentrotus purpuratus
10 Cesar Arenas-Mena Jun 03, 2021
GSE160461
PRO-seq, ATAC-seq, and Pol II ChIP-seq in 20 hour sea urchin embryos (ATAC-Seq)
  • Link icon Strongylocentrotus purpuratus
5 Cesar Arenas-Mena Jun 03, 2021