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144 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Xenopus tropicalis
GSE12975	Expression of known and predicted genes in tissues of Xenopus tropicalis (frog)	Expression profiling by array	Xenopus tropicalis	20	ZIP TXT	Esther T Chan	Apr 16, 2009
GSE19413	ChIP-chip Designs to Interrogate the Xenopus Embryo Genome for Transcription Factor Binding and Epigenetic Regulation	Genome binding/occupancy profiling by genome tiling array	Xenopus tropicalis	10	ZIP TXT PAIR BEDGRAPH BED	Gert Jan Veenstra	Dec 17, 2009
GSE74788	Comparative study of host response to chytridiomycosis in susceptible and resistant toad species	Expression profiling by array	Anaxyrus boreas Rhinella marina Xenopus tropicalis	71	XYS	Thomas Poorten	Apr 18, 2017
GSE133220	Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type Xenopus tropicalis Tail and Notochord During Metamorphosis	Expression profiling by high throughput sequencing	Xenopus tropicalis	9	XLSX TXT SRA Run Selector	Ryan Dale	Jun 14, 2022
GSE148726	Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endodermal gene regulatory network	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Xenopus tropicalis	54	XLSX BED SRA Run Selector	Kitt D. Paraiso	Sep 16, 2020
GSE171687	Sequencing of cDNAs derived from RNA transcripts from nine adult Xenopus tropicalis tissues	Expression profiling by high throughput sequencing	Xenopus tropicalis	9	XLSX	Aaron Zorn	Apr 09, 2021
GSE41161	Principles of nucleation of H3K27 methylation during embryonic development	Genome binding/occupancy profiling by high throughput sequencing	Xenopus tropicalis	16	WIG BED SRA Run Selector	Gert Jan Veenstra	Nov 28, 2013
GSE14025	A Hierarchy of H3K4me3 and H3K27me3 Acquisition in Spatial Gene Regulation in Xenopus Embryos	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Xenopus tropicalis	4	TXT BED SRA Run Selector	Gert Jan Veenstra	Sep 15, 2009
GSE16852	Genome-Wide Transcriptional Response of Silurana (Xenopus) tropicalis to Infection with the Deadly Chytrid Fungus	Expression profiling by array	Xenopus tropicalis	26	TXT	Matt L Settles	Aug 31, 2009
GSE21482	Nucleotide composition-linked divergence of vertebrate core promoter architecture	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Xenopus tropicalis	3	TXT BED SRA Run Selector	Gert Jan Veenstra	Dec 30, 2010
GSE27227	Mapping gene expression in two Xenopus: evolutionary constraints and developmental flexibility	Expression profiling by array	Xenopus laevis Xenopus tropicalis	96	TXT	Itai Yanai	Jun 01, 2011
GSE30146	HEB and E2A function as SMAD/FOXH1 cofactors	Genome binding/occupancy profiling by high throughput sequencing	Xenopus tropicalis	2	TXT BED SRA Run Selector	Se-Jin Yoon	Aug 23, 2011
GSE33360	Discovery of novel microRNAs in rat kidney using microarray analyses	Non-coding RNA profiling by array	Ateles geoffroyi Bos taurus Canis lupus familiaris Danio rerio Equus caballus Gallus gallus Homo sapiens Macaca mulatta Macaca nemestrina Mus musculus Ornithorhynchus anatinus Oryzias latipes Ovis aries Pan paniscus Pan troglodytes Petromyzon marinus Pongo pygmaeus Rattus norvegicus Rhinopithecus bieti Saguinus labiatus Sus scrofa Symphalangus syndactylus Taeniopygia guttata Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis	6	TXT	Fanxue Meng	Nov 02, 2011
GSE37452	RNA sequencing reveals diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development.	Expression profiling by high throughput sequencing	Xenopus tropicalis	40	TXT SRA Run Selector	Kin Fai Au	May 04, 2012
GSE38576	Gene regulatory networks involved in early embryonic Silurana tropicalis development	Expression profiling by array	Xenopus tropicalis	16	TXT	Christopher Joseph Martyniuk	Jul 31, 2012
GSE40149	Effects of Disperse Yellow 7 in Silurana tropicalis Gene Network Analysis	Expression profiling by array	Xenopus tropicalis	8	TXT	Christopher Joseph Martyniuk	Nov 30, 2012
GSE41338	The evolutionary landscape of alternative splicing in vertebrate species	Expression profiling by high throughput sequencing	Anolis carolinensis Gallus gallus Mus musculus Tetraodon nigroviridis Xenopus tropicalis	21	TXT BW SRA Run Selector	Nuno L Barbosa-Morais	Dec 22, 2012
GSE43520	The evolution of lncRNA repertoires and expression patterns in tetrapods	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Gallus gallus Gorilla gorilla Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus Ornithorhynchus anatinus Xenopus tropicalis	55	TXT BEDGRAPH SRA Run Selector	Anamaria Necsulea	Jan 19, 2014
GSE46366	The transcriptomic response to finasteride in the Silurana tropicalis testis	Expression profiling by array	Xenopus tropicalis	8	TXT	Christopher Joseph Martyniuk	Apr 01, 2014
GSE48663	In vivo T-box Transcription Factor Profiling Reveals Joint Regulation of Embryonic Neuro-mesodermal Bipotency	Expression profiling by high throughput sequencing	Xenopus tropicalis	7	TXT SRA Run Selector	George E. Gentsch	Sep 19, 2013