GEO Browser - GEO

Series

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DataSets

29 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Macaca mulatta		BED
GSE167581	Comparative 3D Genome Architecture in Vertebrates	Expression profiling by high throughput sequencing Other	Sus scrofa Rattus norvegicus Ovis aries Oryctolagus cuniculus Mus musculus Macaca mulatta Homo sapiens Gallus gallus Felis catus Danio rerio Canis lupus familiaris Bos taurus	54	BED HDF5 XLS	Mengnan He	Apr 12, 2022
GSE30198	Digital gene expression and global mapping of polyadenylation sites with PolyA-Seq	Expression profiling by high throughput sequencing	Rattus norvegicus Mus musculus Macaca mulatta Homo sapiens Canis lupus familiaris	26	BED SRA Run Selector	Adnan Derti	Jun 25, 2011
GSE90720	Fox Family Protein Jumu Reads 6mA-DNA Codes and Contributes to Zygotic Gene Activation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Rattus norvegicus Mus musculus Macaca mulatta Drosophila melanogaster	22	BED TXT SRA Run Selector	Shunmin He	Jan 14, 2023
GSE167579	Comparative 3D Genome Architecture in Vertebrates (Hi-C)	Other	Rattus norvegicus Ovis aries Oryctolagus cuniculus Mus musculus Macaca mulatta Homo sapiens Gallus gallus Felis catus Danio rerio Canis lupus familiaris Bos taurus	25	BED HDF5 XLS SRA Run Selector	Mengnan He	Apr 12, 2022
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Rattus norvegicus Nomascus leucogenys Mus pahari Mus musculus Mus caroli Macaca mulatta Hylobates moloch Homo sapiens	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE129034	Comparison of chromatin accessibility between human and non-human primates	Genome binding/occupancy profiling by high throughput sequencing	Pongo pygmaeus Pan troglodytes Macaca mulatta Homo sapiens Gorilla gorilla	15	BED SRA Run Selector	Gregory Crawford	Oct 11, 2019
GSE48942	Compararitve Triprimate Peripheral Blood DNA Methylome	Methylation profiling by high throughput sequencing	Pan troglodytes Macaca mulatta Homo sapiens	3	BED BW SRA Run Selector	Gareth Wilson	Feb 01, 2014
GSE60269	Epigenetic modifications are associated with inter-species gene expression variation in primates	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Pan troglodytes Macaca mulatta Homo sapiens	98	BED SRA Run Selector	Xiang Zhou	Nov 09, 2014
GSE70299	The evolution of N6-methyladenosine in primates	Other	Pan troglodytes Macaca mulatta Homo sapiens	16	BED SRA Run Selector	Kevin P. White	Oct 14, 2016
GSE120271	RNA-seq and ChIP-seq for human-specific regulation of neural maturation identified by cross-primate transcriptomics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Pan troglodytes Pan paniscus Macaca mulatta Homo sapiens Gorilla	79	BED BEDGRAPH TXT SRA Run Selector	Fred H Gage	Sep 20, 2020
GSE115065	Epigenetic maintenance of topological domains in the rearranged gibbon genome	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Nomascus leucogenys Macaca mulatta	6	BED BEDGRAPH	Lucia Carbone	May 30, 2018
GSE42413	The Evolution of Lineage-Specific Regulatory Activities in the Human Embryonic Limb	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Macaca mulatta Homo sapiens	56	BAM BED BW SRA Run Selector	Justin Cotney	Jul 02, 2013
GSE60838	Evolutionary changes in promoter and enhancer activity during corticogenesis (non-human)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Macaca mulatta	39	BED BW SRA Run Selector	Steven K Reilly	Mar 06, 2015
GSE63649	Evolutionary changes in promoter and enhancer activity during human corticogenesis	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Macaca mulatta Homo sapiens	63	BED BW	Steven K Reilly	Mar 06, 2015
GSE124711	Comparative Analysis of Gammaherpesvirus Circular RNA	Other	Mus musculus Murid herpesvirus 68 Macacine gammaherpesvirus 4 Macaca mulatta Human gammaherpesvirus 8 Homo sapiens	10	BED SRA Run Selector	Erik K Flemington	Jan 07, 2019
GSE175679	Distinct nuclear compartment-associated genome architecture in the developing mammalian brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Macaca mulatta Homo sapiens	62	BED BW H5 SRA Run Selector	Tomasz Nowakowski	May 28, 2021
GSE241429	Comparative single-cell multiome reveals evolutionary innovations in neural progenitor cells during primate corticogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Macaca mulatta	33	BED MTX TXT	Yiming Sun	Jun 09, 2024
GSE24538	Ab initio identification of transcription start sites (TSSs) in the Rhesus macaque genome by histone modification and RNA-Seq	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Macaca mulatta	3	BED BEDGRAPH TXT SRA Run Selector	Dali Han	Oct 19, 2010
GSE34128	Dramatic effects of social behavior on gene regulation in rhesus macaques [Bisulfite seq]	Methylation profiling by high throughput sequencing	Macaca mulatta	6	BED SRA Run Selector	Jenny Tung	Feb 01, 2012
GSE34426	Transcriptome study in rhesus monkey	Expression profiling by high throughput sequencing	Macaca mulatta	5	BAM BED SRA Run Selector	Jia-Yu Chen	Oct 10, 2012